Gene : FAP409 C. reinhardtii v5.6
Primary Identifier:  ? Cre08.g365050 Defline:  Coiled-Coil Flagellar Associated Protein 409
Genomic Order:  219 Name:  ? Cre08.g365050
Secondary Identifier:  ? PAC:30773930
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre08.g365050 0.5kb upstream 0.5kb upstream 4319 true chromosome_8: 1557525-1561843 Chlamydomonas reinhardtii
Cre08.g365050 0.5kb upstream 0.5kb upstream 500 false chromosome_8: 1561344-1561843 Chlamydomonas reinhardtii
Cre08.g365050 0.5kb downstream 0.5kb downstream 4319 true chromosome_8: 1557025-1561343 Chlamydomonas reinhardtii
Cre08.g365050 0.5kb downstream 0.5kb downstream 500 false chromosome_8: 1557025-1557524 Chlamydomonas reinhardtii
Cre08.g365050 1.0kb upstream 1.0kb upstream 4819 true chromosome_8: 1557525-1562343 Chlamydomonas reinhardtii
Cre08.g365050 1.0kb upstream 1.0kb upstream 1000 false chromosome_8: 1561344-1562343 Chlamydomonas reinhardtii
Cre08.g365050 1.0kb downstream 1.0kb downstream 4819 true chromosome_8: 1556525-1561343 Chlamydomonas reinhardtii
Cre08.g365050 1.0kb downstream 1.0kb downstream 1000 false chromosome_8: 1556525-1557524 Chlamydomonas reinhardtii
Cre08.g365050 2.0kb upstream 2.0kb upstream 5819 true chromosome_8: 1557525-1563343 Chlamydomonas reinhardtii
Cre08.g365050 2.0kb upstream 2.0kb upstream 2000 false chromosome_8: 1561344-1563343 Chlamydomonas reinhardtii
Cre08.g365050 2.0kb downstream 2.0kb downstream 5819 true chromosome_8: 1555525-1561343 Chlamydomonas reinhardtii
Cre08.g365050 2.0kb downstream 2.0kb downstream 2000 false chromosome_8: 1555525-1557524 Chlamydomonas reinhardtii
Cre08.g365050 5.0kb upstream 5.0kb upstream 8819 true chromosome_8: 1557525-1566343 Chlamydomonas reinhardtii
Cre08.g365050 5.0kb upstream 5.0kb upstream 5000 false chromosome_8: 1561344-1566343 Chlamydomonas reinhardtii
Cre08.g365050 5.0kb downstream 5.0kb downstream 8819 true chromosome_8: 1552525-1561343 Chlamydomonas reinhardtii
Cre08.g365050 5.0kb downstream 5.0kb downstream 5000 false chromosome_8: 1552525-1557524 Chlamydomonas reinhardtii
Cre08.g365050 10.0kb upstream 10.0kb upstream 13819 true chromosome_8: 1557525-1571343 Chlamydomonas reinhardtii
Cre08.g365050 10.0kb upstream 10.0kb upstream 10000 false chromosome_8: 1561344-1571343 Chlamydomonas reinhardtii
Cre08.g365050 10.0kb downstream 10.0kb downstream 13819 true chromosome_8: 1547525-1561343 Chlamydomonas reinhardtii
Cre08.g365050 10.0kb downstream 10.0kb downstream 10000 false chromosome_8: 1547525-1557524 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080008 5260 Chlorophyte View MSA
123397825 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.188        
cufflinks 0.194        
cufflinks 0.131     Low  
cufflinks 0.17     Low  
cufflinks 0.148     Low  
cufflinks 0.194        
cufflinks 0.156     Low  
cufflinks 0.242       High
cufflinks 0.057     Low Low
cufflinks 0.094        
cufflinks 0.05     Low Low
cufflinks 0.173     Low  
cufflinks 0.077     Low  
cufflinks 0.136     Low  
cufflinks 0.027     Low Low
cufflinks 0.198       High
cufflinks 0.042     Low Low
cufflinks 0.116     Low  
cufflinks 0.049     Low Low
cufflinks 0.129     Low  
cufflinks 0.049     Low Low
cufflinks 0.085     Low  
cufflinks 0.204       High
cufflinks 0.141     Low  
cufflinks 0.061     Low  
cufflinks 1.86245 0.210546 3.51435    
cufflinks 0.802698 0.0 1.80569    
cufflinks 0.407578 0.0 1.12527    
cufflinks 2.07463 0.262205 3.88706    
cufflinks 2.3168 0.231538 4.40206    

0 Strain