Gene : FAP139 C. reinhardtii v5.6
Primary Identifier:  ? Cre09.g387912 Defline:  Coiled-Coil Flagellar Associated Protein 139
Genomic Order:  500 Name:  ? Cre09.g387912
Secondary Identifier:  ? PAC:30781535
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g387912 0.5kb upstream 0.5kb upstream 8979 true chromosome_9: 3255850-3264828 Chlamydomonas reinhardtii
Cre09.g387912 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 3255850-3256349 Chlamydomonas reinhardtii
Cre09.g387912 0.5kb downstream 0.5kb downstream 8979 true chromosome_9: 3256350-3265328 Chlamydomonas reinhardtii
Cre09.g387912 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 3264829-3265328 Chlamydomonas reinhardtii
Cre09.g387912 1.0kb upstream 1.0kb upstream 9479 true chromosome_9: 3255350-3264828 Chlamydomonas reinhardtii
Cre09.g387912 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 3255350-3256349 Chlamydomonas reinhardtii
Cre09.g387912 1.0kb downstream 1.0kb downstream 9479 true chromosome_9: 3256350-3265828 Chlamydomonas reinhardtii
Cre09.g387912 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 3264829-3265828 Chlamydomonas reinhardtii
Cre09.g387912 2.0kb upstream 2.0kb upstream 10479 true chromosome_9: 3254350-3264828 Chlamydomonas reinhardtii
Cre09.g387912 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 3254350-3256349 Chlamydomonas reinhardtii
Cre09.g387912 2.0kb downstream 2.0kb downstream 10479 true chromosome_9: 3256350-3266828 Chlamydomonas reinhardtii
Cre09.g387912 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 3264829-3266828 Chlamydomonas reinhardtii
Cre09.g387912 5.0kb upstream 5.0kb upstream 13479 true chromosome_9: 3251350-3264828 Chlamydomonas reinhardtii
Cre09.g387912 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 3251350-3256349 Chlamydomonas reinhardtii
Cre09.g387912 5.0kb downstream 5.0kb downstream 13479 true chromosome_9: 3256350-3269828 Chlamydomonas reinhardtii
Cre09.g387912 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 3264829-3269828 Chlamydomonas reinhardtii
Cre09.g387912 10.0kb upstream 10.0kb upstream 18479 true chromosome_9: 3246350-3264828 Chlamydomonas reinhardtii
Cre09.g387912 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 3246350-3256349 Chlamydomonas reinhardtii
Cre09.g387912 10.0kb downstream 10.0kb downstream 18479 true chromosome_9: 3256350-3274828 Chlamydomonas reinhardtii
Cre09.g387912 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 3264829-3274828 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124085924 5260 Chlorophyte View MSA
123403349 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.261       Low
cufflinks 0.738        
cufflinks 2.739       High
cufflinks 3.783       High
cufflinks 0.496        
cufflinks 0.752        
cufflinks 0.33       Low
cufflinks 1.891       High
cufflinks 0.215       Low
cufflinks 0.824        
cufflinks 3.761       High
cufflinks 1.436        
cufflinks 0.529        
cufflinks 0.876        
cufflinks 1.119        
cufflinks 0.497        
cufflinks 0.578        
cufflinks 1.295        
cufflinks 0.429        
cufflinks 1.445        
cufflinks 1.411        
cufflinks 0.255       Low
cufflinks 0.482        
cufflinks 1.546        
cufflinks 0.19       Low
cufflinks 0.9094 0.0885663 1.73023    
cufflinks 2.41213 0.465818 4.35843    
cufflinks 9.49834 0.0 19.1562   High
cufflinks 2.96641 0.480538 5.45227    
cufflinks 7.32246 1.38802 13.2569   Low

0 Strain