Gene : VPS23 C. reinhardtii v5.6
Primary Identifier:  ? Cre07.g351050 Defline:  (1 of 1) K12183 - ESCRT-I complex subunit TSG101 (TSG101, STP22, VPS23)
Genomic Order:  920 Name:  ? Cre07.g351050
Secondary Identifier:  ? PAC:30774662
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre07.g351050 0.5kb upstream 0.5kb upstream 5132 true chromosome_7: 5510583-5515714 Chlamydomonas reinhardtii
Cre07.g351050 0.5kb upstream 0.5kb upstream 500 false chromosome_7: 5510583-5511082 Chlamydomonas reinhardtii
Cre07.g351050 0.5kb downstream 0.5kb downstream 5132 true chromosome_7: 5511083-5516214 Chlamydomonas reinhardtii
Cre07.g351050 0.5kb downstream 0.5kb downstream 500 false chromosome_7: 5515715-5516214 Chlamydomonas reinhardtii
Cre07.g351050 1.0kb upstream 1.0kb upstream 5632 true chromosome_7: 5510083-5515714 Chlamydomonas reinhardtii
Cre07.g351050 1.0kb upstream 1.0kb upstream 1000 false chromosome_7: 5510083-5511082 Chlamydomonas reinhardtii
Cre07.g351050 1.0kb downstream 1.0kb downstream 5632 true chromosome_7: 5511083-5516714 Chlamydomonas reinhardtii
Cre07.g351050 1.0kb downstream 1.0kb downstream 1000 false chromosome_7: 5515715-5516714 Chlamydomonas reinhardtii
Cre07.g351050 2.0kb upstream 2.0kb upstream 6632 true chromosome_7: 5509083-5515714 Chlamydomonas reinhardtii
Cre07.g351050 2.0kb upstream 2.0kb upstream 2000 false chromosome_7: 5509083-5511082 Chlamydomonas reinhardtii
Cre07.g351050 2.0kb downstream 2.0kb downstream 6632 true chromosome_7: 5511083-5517714 Chlamydomonas reinhardtii
Cre07.g351050 2.0kb downstream 2.0kb downstream 2000 false chromosome_7: 5515715-5517714 Chlamydomonas reinhardtii
Cre07.g351050 5.0kb upstream 5.0kb upstream 9632 true chromosome_7: 5506083-5515714 Chlamydomonas reinhardtii
Cre07.g351050 5.0kb upstream 5.0kb upstream 5000 false chromosome_7: 5506083-5511082 Chlamydomonas reinhardtii
Cre07.g351050 5.0kb downstream 5.0kb downstream 9632 true chromosome_7: 5511083-5520714 Chlamydomonas reinhardtii
Cre07.g351050 5.0kb downstream 5.0kb downstream 5000 false chromosome_7: 5515715-5520714 Chlamydomonas reinhardtii
Cre07.g351050 10.0kb upstream 10.0kb upstream 14632 true chromosome_7: 5501083-5515714 Chlamydomonas reinhardtii
Cre07.g351050 10.0kb upstream 10.0kb upstream 10000 false chromosome_7: 5501083-5511082 Chlamydomonas reinhardtii
Cre07.g351050 10.0kb downstream 10.0kb downstream 14632 true chromosome_7: 5511083-5525714 Chlamydomonas reinhardtii
Cre07.g351050 10.0kb downstream 10.0kb downstream 10000 false chromosome_7: 5515715-5525714 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112161 5260 Chlorophyte View MSA
123427966 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.539        
cufflinks 4.412        
cufflinks 4.163        
cufflinks 3.893        
cufflinks 4.179        
cufflinks 3.255        
cufflinks 4.604        
cufflinks 4.116        
cufflinks 3.267        
cufflinks 2.956        
cufflinks 3.128        
cufflinks 4.151        
cufflinks 2.932        
cufflinks 3.867        
cufflinks 2.852        
cufflinks 3.244        
cufflinks 4.369        
cufflinks 5.947       High
cufflinks 0.874       Low
cufflinks 3.769        
cufflinks 2.941        
cufflinks 4.027        
cufflinks 3.987        
cufflinks 4.111        
cufflinks 3.595        
cufflinks 19.2967 1.23425 37.3591    
cufflinks 9.91329 2.66599 17.1606    
cufflinks 11.3985 0.0 22.906    
cufflinks 6.43442 1.04816 11.8207    
cufflinks 7.88649 1.58149 14.1915    

0 Strain