Gene : PKHD1 C. reinhardtii v5.6
Primary Identifier:  ? Cre07.g340450 Defline:  (1 of 1) PTHR11915//PTHR11915:SF310 - SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN // PICKLED EGGS, ISOFORM A
Genomic Order:  673 Name:  ? Cre07.g340450
Secondary Identifier:  ? PAC:30775098
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre07.g340450 0.5kb upstream 0.5kb upstream 18692 true chromosome_7: 4064426-4083117 Chlamydomonas reinhardtii
Cre07.g340450 0.5kb upstream 0.5kb upstream 500 false chromosome_7: 4064426-4064925 Chlamydomonas reinhardtii
Cre07.g340450 0.5kb downstream 0.5kb downstream 18692 true chromosome_7: 4064926-4083617 Chlamydomonas reinhardtii
Cre07.g340450 0.5kb downstream 0.5kb downstream 500 false chromosome_7: 4083118-4083617 Chlamydomonas reinhardtii
Cre07.g340450 1.0kb upstream 1.0kb upstream 19192 true chromosome_7: 4063926-4083117 Chlamydomonas reinhardtii
Cre07.g340450 1.0kb upstream 1.0kb upstream 1000 false chromosome_7: 4063926-4064925 Chlamydomonas reinhardtii
Cre07.g340450 1.0kb downstream 1.0kb downstream 19192 true chromosome_7: 4064926-4084117 Chlamydomonas reinhardtii
Cre07.g340450 1.0kb downstream 1.0kb downstream 1000 false chromosome_7: 4083118-4084117 Chlamydomonas reinhardtii
Cre07.g340450 2.0kb upstream 2.0kb upstream 20192 true chromosome_7: 4062926-4083117 Chlamydomonas reinhardtii
Cre07.g340450 2.0kb upstream 2.0kb upstream 2000 false chromosome_7: 4062926-4064925 Chlamydomonas reinhardtii
Cre07.g340450 2.0kb downstream 2.0kb downstream 20192 true chromosome_7: 4064926-4085117 Chlamydomonas reinhardtii
Cre07.g340450 2.0kb downstream 2.0kb downstream 2000 false chromosome_7: 4083118-4085117 Chlamydomonas reinhardtii
Cre07.g340450 5.0kb upstream 5.0kb upstream 23192 true chromosome_7: 4059926-4083117 Chlamydomonas reinhardtii
Cre07.g340450 5.0kb upstream 5.0kb upstream 5000 false chromosome_7: 4059926-4064925 Chlamydomonas reinhardtii
Cre07.g340450 5.0kb downstream 5.0kb downstream 23192 true chromosome_7: 4064926-4088117 Chlamydomonas reinhardtii
Cre07.g340450 5.0kb downstream 5.0kb downstream 5000 false chromosome_7: 4083118-4088117 Chlamydomonas reinhardtii
Cre07.g340450 10.0kb upstream 10.0kb upstream 28192 true chromosome_7: 4054926-4083117 Chlamydomonas reinhardtii
Cre07.g340450 10.0kb upstream 10.0kb upstream 10000 false chromosome_7: 4054926-4064925 Chlamydomonas reinhardtii
Cre07.g340450 10.0kb downstream 10.0kb downstream 28192 true chromosome_7: 4064926-4093117 Chlamydomonas reinhardtii
Cre07.g340450 10.0kb downstream 10.0kb downstream 10000 false chromosome_7: 4083118-4093117 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094451 5260 Chlorophyte View MSA
123411287 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.16       Low
cufflinks 9.969        
cufflinks 11.003        
cufflinks 11.677        
cufflinks 6.261        
cufflinks 11.76        
cufflinks 3.231       Low
cufflinks 12.074        
cufflinks 4.57        
cufflinks 1.841       Low
cufflinks 14.975     High High
cufflinks 10.212        
cufflinks 3.229       Low
cufflinks 12.75        
cufflinks 6.217        
cufflinks 8.689        
cufflinks 10.727        
cufflinks 8.507        
cufflinks 0.625       Low
cufflinks 5.987        
cufflinks 8.232        
cufflinks 7.842        
cufflinks 6.133        
cufflinks 11.298        
cufflinks 9.016        
cufflinks 16.053 0.0 32.9259 High High
cufflinks 67.9974 8.41429 127.58 High  
cufflinks 17.7639 0.0 37.0714    
cufflinks 33.6251 0.0 68.2499 High High
cufflinks 18.9365 0.46951 37.4034    

0 Strain