Gene : Cre08.g360450 C. reinhardtii v5.6
Defline:  (1 of 25) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  113
Name:  ? Cre08.g360450 Secondary Identifier:  ? PAC:30774007
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre08.g360450 0.5kb upstream 0.5kb upstream 12922 true chromosome_8: 721750-734671 Chlamydomonas reinhardtii
Cre08.g360450 0.5kb upstream 0.5kb upstream 500 false chromosome_8: 721750-722249 Chlamydomonas reinhardtii
Cre08.g360450 0.5kb downstream 0.5kb downstream 12922 true chromosome_8: 722250-735171 Chlamydomonas reinhardtii
Cre08.g360450 0.5kb downstream 0.5kb downstream 500 false chromosome_8: 734672-735171 Chlamydomonas reinhardtii
Cre08.g360450 1.0kb upstream 1.0kb upstream 13422 true chromosome_8: 721250-734671 Chlamydomonas reinhardtii
Cre08.g360450 1.0kb upstream 1.0kb upstream 1000 false chromosome_8: 721250-722249 Chlamydomonas reinhardtii
Cre08.g360450 1.0kb downstream 1.0kb downstream 13422 true chromosome_8: 722250-735671 Chlamydomonas reinhardtii
Cre08.g360450 1.0kb downstream 1.0kb downstream 1000 false chromosome_8: 734672-735671 Chlamydomonas reinhardtii
Cre08.g360450 2.0kb upstream 2.0kb upstream 14422 true chromosome_8: 720250-734671 Chlamydomonas reinhardtii
Cre08.g360450 2.0kb upstream 2.0kb upstream 2000 false chromosome_8: 720250-722249 Chlamydomonas reinhardtii
Cre08.g360450 2.0kb downstream 2.0kb downstream 14422 true chromosome_8: 722250-736671 Chlamydomonas reinhardtii
Cre08.g360450 2.0kb downstream 2.0kb downstream 2000 false chromosome_8: 734672-736671 Chlamydomonas reinhardtii
Cre08.g360450 5.0kb upstream 5.0kb upstream 17422 true chromosome_8: 717250-734671 Chlamydomonas reinhardtii
Cre08.g360450 5.0kb upstream 5.0kb upstream 5000 false chromosome_8: 717250-722249 Chlamydomonas reinhardtii
Cre08.g360450 5.0kb downstream 5.0kb downstream 17422 true chromosome_8: 722250-739671 Chlamydomonas reinhardtii
Cre08.g360450 5.0kb downstream 5.0kb downstream 5000 false chromosome_8: 734672-739671 Chlamydomonas reinhardtii
Cre08.g360450 10.0kb upstream 10.0kb upstream 22422 true chromosome_8: 712250-734671 Chlamydomonas reinhardtii
Cre08.g360450 10.0kb upstream 10.0kb upstream 10000 false chromosome_8: 712250-722249 Chlamydomonas reinhardtii
Cre08.g360450 10.0kb downstream 10.0kb downstream 22422 true chromosome_8: 722250-744671 Chlamydomonas reinhardtii
Cre08.g360450 10.0kb downstream 10.0kb downstream 10000 false chromosome_8: 734672-744671 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081623 5260 Chlorophyte View MSA
123399344 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.015     Low Low
cufflinks 0.066     Low  
cufflinks 0.237        
cufflinks 0.052     Low  
cufflinks 0.057     Low  
cufflinks 0.195        
cufflinks 0.006     Low Low
cufflinks 0.087     Low  
cufflinks 0.054     Low  
cufflinks 0.027     Low  
cufflinks 0.088     Low  
cufflinks 0.462       High
cufflinks 0.297       High
cufflinks 0.325       High
cufflinks 0.027     Low  
cufflinks 0.092     Low  
cufflinks 0.134        
cufflinks 0.125     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.538       High
cufflinks 0.082     Low  
cufflinks 0.007     Low Low
cufflinks 0.294       High
cufflinks 0.193     Low  
cufflinks 0.043     Low  
cufflinks 0.26847 0.0 0.550735    
cufflinks 1.14442 0.125915 2.16292    
cufflinks 5.9822 0.0 12.0389    
cufflinks 0.650057 0.0510097 1.2491    
cufflinks 11.3704 1.45126 21.2896    

0 Strain