Gene : FAP344 C. reinhardtii v5.6
Primary Identifier:  ? Cre08.g358564 Defline:  (1 of 6) PF06985 - Heterokaryon incompatibility protein (HET) (HET)
Genomic Order:  52 Name:  ? Cre08.g358564
Secondary Identifier:  ? PAC:30774070
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre08.g358564 0.5kb upstream 0.5kb upstream 10726 true chromosome_8: 300464-311189 Chlamydomonas reinhardtii
Cre08.g358564 0.5kb upstream 0.5kb upstream 500 false chromosome_8: 310690-311189 Chlamydomonas reinhardtii
Cre08.g358564 0.5kb downstream 0.5kb downstream 10726 true chromosome_8: 299964-310689 Chlamydomonas reinhardtii
Cre08.g358564 0.5kb downstream 0.5kb downstream 500 false chromosome_8: 299964-300463 Chlamydomonas reinhardtii
Cre08.g358564 1.0kb upstream 1.0kb upstream 11226 true chromosome_8: 300464-311689 Chlamydomonas reinhardtii
Cre08.g358564 1.0kb upstream 1.0kb upstream 1000 false chromosome_8: 310690-311689 Chlamydomonas reinhardtii
Cre08.g358564 1.0kb downstream 1.0kb downstream 11226 true chromosome_8: 299464-310689 Chlamydomonas reinhardtii
Cre08.g358564 1.0kb downstream 1.0kb downstream 1000 false chromosome_8: 299464-300463 Chlamydomonas reinhardtii
Cre08.g358564 2.0kb upstream 2.0kb upstream 12226 true chromosome_8: 300464-312689 Chlamydomonas reinhardtii
Cre08.g358564 2.0kb upstream 2.0kb upstream 2000 false chromosome_8: 310690-312689 Chlamydomonas reinhardtii
Cre08.g358564 2.0kb downstream 2.0kb downstream 12226 true chromosome_8: 298464-310689 Chlamydomonas reinhardtii
Cre08.g358564 2.0kb downstream 2.0kb downstream 2000 false chromosome_8: 298464-300463 Chlamydomonas reinhardtii
Cre08.g358564 5.0kb upstream 5.0kb upstream 15226 true chromosome_8: 300464-315689 Chlamydomonas reinhardtii
Cre08.g358564 5.0kb upstream 5.0kb upstream 5000 false chromosome_8: 310690-315689 Chlamydomonas reinhardtii
Cre08.g358564 5.0kb downstream 5.0kb downstream 15226 true chromosome_8: 295464-310689 Chlamydomonas reinhardtii
Cre08.g358564 5.0kb downstream 5.0kb downstream 5000 false chromosome_8: 295464-300463 Chlamydomonas reinhardtii
Cre08.g358564 10.0kb upstream 10.0kb upstream 20226 true chromosome_8: 300464-320689 Chlamydomonas reinhardtii
Cre08.g358564 10.0kb upstream 10.0kb upstream 10000 false chromosome_8: 310690-320689 Chlamydomonas reinhardtii
Cre08.g358564 10.0kb downstream 10.0kb downstream 20226 true chromosome_8: 290464-310689 Chlamydomonas reinhardtii
Cre08.g358564 10.0kb downstream 10.0kb downstream 10000 false chromosome_8: 290464-300463 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124086313 5260 Chlorophyte View MSA
123403680 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.025     Low Low
cufflinks 0.426        
cufflinks 0.474        
cufflinks 0.873        
cufflinks 0.247        
cufflinks 0.236        
cufflinks 0.673        
cufflinks 0.725        
cufflinks 0.005     Low Low
cufflinks 0.073        
cufflinks 0.975       High
cufflinks 0.553        
cufflinks 0.049     Low  
cufflinks 0.272        
cufflinks 0.497        
cufflinks 0.025     Low Low
cufflinks 0.019     Low Low
cufflinks 0.373        
cufflinks 0.172        
cufflinks 1.181       High
cufflinks 0.541        
cufflinks 0.015     Low Low
cufflinks 0.765        
cufflinks 0.387        
cufflinks 0.02     Low Low
cufflinks 1.30365 0.117533 2.48976   High
cufflinks 0.986549 0.0 2.07042    
cufflinks 2.14869 0.0 4.60466   High
cufflinks 2.83459 0.47358 5.1956   High
cufflinks 2.81027 0.489059 5.13148    

0 Strain