Gene : POC7 C. reinhardtii v5.6
Primary Identifier:  ? Cre07.g356400 Defline:  (1 of 1) PTHR12951 - RETINAL PROTEIN 4
Genomic Order:  1033 Name:  ? Cre07.g356400
Secondary Identifier:  ? PAC:30774471
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre07.g356400 0.5kb upstream 0.5kb upstream 2797 true chromosome_7: 6202248-6205044 Chlamydomonas reinhardtii
Cre07.g356400 0.5kb upstream 0.5kb upstream 500 false chromosome_7: 6202248-6202747 Chlamydomonas reinhardtii
Cre07.g356400 0.5kb downstream 0.5kb downstream 2797 true chromosome_7: 6202748-6205544 Chlamydomonas reinhardtii
Cre07.g356400 0.5kb downstream 0.5kb downstream 500 false chromosome_7: 6205045-6205544 Chlamydomonas reinhardtii
Cre07.g356400 1.0kb upstream 1.0kb upstream 3297 true chromosome_7: 6201748-6205044 Chlamydomonas reinhardtii
Cre07.g356400 1.0kb upstream 1.0kb upstream 1000 false chromosome_7: 6201748-6202747 Chlamydomonas reinhardtii
Cre07.g356400 1.0kb downstream 1.0kb downstream 3297 true chromosome_7: 6202748-6206044 Chlamydomonas reinhardtii
Cre07.g356400 1.0kb downstream 1.0kb downstream 1000 false chromosome_7: 6205045-6206044 Chlamydomonas reinhardtii
Cre07.g356400 2.0kb upstream 2.0kb upstream 4297 true chromosome_7: 6200748-6205044 Chlamydomonas reinhardtii
Cre07.g356400 2.0kb upstream 2.0kb upstream 2000 false chromosome_7: 6200748-6202747 Chlamydomonas reinhardtii
Cre07.g356400 2.0kb downstream 2.0kb downstream 4297 true chromosome_7: 6202748-6207044 Chlamydomonas reinhardtii
Cre07.g356400 2.0kb downstream 2.0kb downstream 2000 false chromosome_7: 6205045-6207044 Chlamydomonas reinhardtii
Cre07.g356400 5.0kb upstream 5.0kb upstream 7297 true chromosome_7: 6197748-6205044 Chlamydomonas reinhardtii
Cre07.g356400 5.0kb upstream 5.0kb upstream 5000 false chromosome_7: 6197748-6202747 Chlamydomonas reinhardtii
Cre07.g356400 5.0kb downstream 5.0kb downstream 7297 true chromosome_7: 6202748-6210044 Chlamydomonas reinhardtii
Cre07.g356400 5.0kb downstream 5.0kb downstream 5000 false chromosome_7: 6205045-6210044 Chlamydomonas reinhardtii
Cre07.g356400 10.0kb upstream 10.0kb upstream 12297 true chromosome_7: 6192748-6205044 Chlamydomonas reinhardtii
Cre07.g356400 10.0kb upstream 10.0kb upstream 10000 false chromosome_7: 6192748-6202747 Chlamydomonas reinhardtii
Cre07.g356400 10.0kb downstream 10.0kb downstream 12297 true chromosome_7: 6202748-6215044 Chlamydomonas reinhardtii
Cre07.g356400 10.0kb downstream 10.0kb downstream 10000 false chromosome_7: 6205045-6215044 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110858 5260 Chlorophyte View MSA
123423152 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.086     High Low
cufflinks 78.809     High  
cufflinks 95.851     High High
cufflinks 85.286     High  
cufflinks 84.863     High  
cufflinks 83.575     High  
cufflinks 78.947     High  
cufflinks 85.627     High  
cufflinks 24.683     High Low
cufflinks 50.324     High  
cufflinks 64.544     High  
cufflinks 61.13     High  
cufflinks 82.162     High  
cufflinks 83.545     High  
cufflinks 65.768     High  
cufflinks 30.331     High Low
cufflinks 31.458     High Low
cufflinks 79.294     High  
cufflinks 26.866     High Low
cufflinks 56.036     High  
cufflinks 63.067     High  
cufflinks 29.709     High Low
cufflinks 66.126     High  
cufflinks 72.071     High  
cufflinks 34.097     High Low
cufflinks 63.0479 0.177991 125.918 High  
cufflinks 66.0219 16.4711 115.573 High Low
cufflinks 164.387 0.0 343.918 High High
cufflinks 61.8974 0.179886 123.615 High  
cufflinks 114.554 9.23094 219.877 High  

0 Strain