Gene : Cre07.g315100 C. reinhardtii v5.6
Defline:  (1 of 2) 1.5.4.1 - Pyrimidodiazepine synthase Genomic Order:  69
Name:  ? Cre07.g315100 Secondary Identifier:  ? PAC:30775039
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre07.g315100 0.5kb upstream 0.5kb upstream 3340 true chromosome_7: 417197-420536 Chlamydomonas reinhardtii
Cre07.g315100 0.5kb upstream 0.5kb upstream 500 false chromosome_7: 420037-420536 Chlamydomonas reinhardtii
Cre07.g315100 0.5kb downstream 0.5kb downstream 3340 true chromosome_7: 416697-420036 Chlamydomonas reinhardtii
Cre07.g315100 0.5kb downstream 0.5kb downstream 500 false chromosome_7: 416697-417196 Chlamydomonas reinhardtii
Cre07.g315100 1.0kb upstream 1.0kb upstream 3840 true chromosome_7: 417197-421036 Chlamydomonas reinhardtii
Cre07.g315100 1.0kb upstream 1.0kb upstream 1000 false chromosome_7: 420037-421036 Chlamydomonas reinhardtii
Cre07.g315100 1.0kb downstream 1.0kb downstream 3840 true chromosome_7: 416197-420036 Chlamydomonas reinhardtii
Cre07.g315100 1.0kb downstream 1.0kb downstream 1000 false chromosome_7: 416197-417196 Chlamydomonas reinhardtii
Cre07.g315100 2.0kb upstream 2.0kb upstream 4840 true chromosome_7: 417197-422036 Chlamydomonas reinhardtii
Cre07.g315100 2.0kb upstream 2.0kb upstream 2000 false chromosome_7: 420037-422036 Chlamydomonas reinhardtii
Cre07.g315100 2.0kb downstream 2.0kb downstream 4840 true chromosome_7: 415197-420036 Chlamydomonas reinhardtii
Cre07.g315100 2.0kb downstream 2.0kb downstream 2000 false chromosome_7: 415197-417196 Chlamydomonas reinhardtii
Cre07.g315100 5.0kb upstream 5.0kb upstream 7840 true chromosome_7: 417197-425036 Chlamydomonas reinhardtii
Cre07.g315100 5.0kb upstream 5.0kb upstream 5000 false chromosome_7: 420037-425036 Chlamydomonas reinhardtii
Cre07.g315100 5.0kb downstream 5.0kb downstream 7840 true chromosome_7: 412197-420036 Chlamydomonas reinhardtii
Cre07.g315100 5.0kb downstream 5.0kb downstream 5000 false chromosome_7: 412197-417196 Chlamydomonas reinhardtii
Cre07.g315100 10.0kb upstream 10.0kb upstream 12840 true chromosome_7: 417197-430036 Chlamydomonas reinhardtii
Cre07.g315100 10.0kb upstream 10.0kb upstream 10000 false chromosome_7: 420037-430036 Chlamydomonas reinhardtii
Cre07.g315100 10.0kb downstream 10.0kb downstream 12840 true chromosome_7: 407197-420036 Chlamydomonas reinhardtii
Cre07.g315100 10.0kb downstream 10.0kb downstream 10000 false chromosome_7: 407197-417196 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124093784 5260 Chlorophyte View MSA
123427976 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.823       Low
cufflinks 8.19        
cufflinks 12.832       High
cufflinks 10.412        
cufflinks 8.737        
cufflinks 8.946        
cufflinks 6.503        
cufflinks 12.123       High
cufflinks 1.382       Low
cufflinks 5.843        
cufflinks 9.52        
cufflinks 3.992        
cufflinks 11.611     High  
cufflinks 7.396        
cufflinks 4.02        
cufflinks 2.723        
cufflinks 1.21       Low
cufflinks 10.96        
cufflinks 2.93        
cufflinks 4.392        
cufflinks 4.475        
cufflinks 0.684       Low
cufflinks 3.866        
cufflinks 13.758       High
cufflinks 0.879       Low
cufflinks 10.4142 1.76808 19.0604    
cufflinks 15.435 4.10803 26.762    
cufflinks 20.4314 0.0 41.0841   High
cufflinks 11.2409 1.8856 20.5962    
cufflinks 29.5783 5.42864 53.7279 High High

0 Strain