Gene : ICL1 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g282800 Defline:  (1 of 1) 4.1.3.1 - Isocitrate lyase / Isocitritase
Genomic Order:  963 Name:  ? Cre06.g282800
Secondary Identifier:  ? PAC:30779483
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii GLYOXYLATE-BYPASS Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-561 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g282800 0.5kb upstream 0.5kb upstream 4490 true chromosome_6: 5283870-5288359 Chlamydomonas reinhardtii
Cre06.g282800 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 5283870-5284369 Chlamydomonas reinhardtii
Cre06.g282800 0.5kb downstream 0.5kb downstream 4490 true chromosome_6: 5284370-5288859 Chlamydomonas reinhardtii
Cre06.g282800 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 5288360-5288859 Chlamydomonas reinhardtii
Cre06.g282800 1.0kb upstream 1.0kb upstream 4990 true chromosome_6: 5283370-5288359 Chlamydomonas reinhardtii
Cre06.g282800 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 5283370-5284369 Chlamydomonas reinhardtii
Cre06.g282800 1.0kb downstream 1.0kb downstream 4990 true chromosome_6: 5284370-5289359 Chlamydomonas reinhardtii
Cre06.g282800 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 5288360-5289359 Chlamydomonas reinhardtii
Cre06.g282800 2.0kb upstream 2.0kb upstream 5990 true chromosome_6: 5282370-5288359 Chlamydomonas reinhardtii
Cre06.g282800 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 5282370-5284369 Chlamydomonas reinhardtii
Cre06.g282800 2.0kb downstream 2.0kb downstream 5990 true chromosome_6: 5284370-5290359 Chlamydomonas reinhardtii
Cre06.g282800 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 5288360-5290359 Chlamydomonas reinhardtii
Cre06.g282800 5.0kb upstream 5.0kb upstream 8990 true chromosome_6: 5279370-5288359 Chlamydomonas reinhardtii
Cre06.g282800 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 5279370-5284369 Chlamydomonas reinhardtii
Cre06.g282800 5.0kb downstream 5.0kb downstream 8990 true chromosome_6: 5284370-5293359 Chlamydomonas reinhardtii
Cre06.g282800 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 5288360-5293359 Chlamydomonas reinhardtii
Cre06.g282800 10.0kb upstream 10.0kb upstream 13990 true chromosome_6: 5274370-5288359 Chlamydomonas reinhardtii
Cre06.g282800 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 5274370-5284369 Chlamydomonas reinhardtii
Cre06.g282800 10.0kb downstream 10.0kb downstream 13990 true chromosome_6: 5284370-5298359 Chlamydomonas reinhardtii
Cre06.g282800 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 5288360-5298359 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124097959 5260 Chlorophyte View MSA
123428552 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 348.688     High  
cufflinks 1146.72     High High
cufflinks 653.961     High  
cufflinks 9.235        
cufflinks 1126.24     High High
cufflinks 831.625     High High
cufflinks 678.765     High  
cufflinks 4.315       Low
cufflinks 607.921     High  
cufflinks 457.687     High  
cufflinks 24.817     High  
cufflinks 6.036       Low
cufflinks 339.204     High  
cufflinks 968.943     High High
cufflinks 0.925       Low
cufflinks 504.458     High  
cufflinks 11.767     High  
cufflinks 567.139     High  
cufflinks 10.962     High  
cufflinks 77.106     High  
cufflinks 3.22       Low
cufflinks 3.762       Low
cufflinks 40.625     High  
cufflinks 14.278        
cufflinks 3.221       Low
cufflinks 945.535 129.733 1761.34 High Low
cufflinks 1650.43 52.5872 3248.28 High  
cufflinks 714.016 0.0 1522.56 High  
cufflinks 2719.7 931.583 4507.81 High High
cufflinks 1253.45 60.2726 2446.63 High  

0 Strain