Gene : CGLD39 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g283000 Defline:  Conserved in the Green Lineage and Diatoms
Genomic Order:  968 Name:  ? Cre06.g283000
Secondary Identifier:  ? PAC:30780101
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g283000 0.5kb upstream 0.5kb upstream 7315 true chromosome_6: 5301676-5308990 Chlamydomonas reinhardtii
Cre06.g283000 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 5301676-5302175 Chlamydomonas reinhardtii
Cre06.g283000 0.5kb downstream 0.5kb downstream 7315 true chromosome_6: 5302176-5309490 Chlamydomonas reinhardtii
Cre06.g283000 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 5308991-5309490 Chlamydomonas reinhardtii
Cre06.g283000 1.0kb upstream 1.0kb upstream 7815 true chromosome_6: 5301176-5308990 Chlamydomonas reinhardtii
Cre06.g283000 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 5301176-5302175 Chlamydomonas reinhardtii
Cre06.g283000 1.0kb downstream 1.0kb downstream 7815 true chromosome_6: 5302176-5309990 Chlamydomonas reinhardtii
Cre06.g283000 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 5308991-5309990 Chlamydomonas reinhardtii
Cre06.g283000 2.0kb upstream 2.0kb upstream 8815 true chromosome_6: 5300176-5308990 Chlamydomonas reinhardtii
Cre06.g283000 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 5300176-5302175 Chlamydomonas reinhardtii
Cre06.g283000 2.0kb downstream 2.0kb downstream 8815 true chromosome_6: 5302176-5310990 Chlamydomonas reinhardtii
Cre06.g283000 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 5308991-5310990 Chlamydomonas reinhardtii
Cre06.g283000 5.0kb upstream 5.0kb upstream 11815 true chromosome_6: 5297176-5308990 Chlamydomonas reinhardtii
Cre06.g283000 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 5297176-5302175 Chlamydomonas reinhardtii
Cre06.g283000 5.0kb downstream 5.0kb downstream 11815 true chromosome_6: 5302176-5313990 Chlamydomonas reinhardtii
Cre06.g283000 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 5308991-5313990 Chlamydomonas reinhardtii
Cre06.g283000 10.0kb upstream 10.0kb upstream 16815 true chromosome_6: 5292176-5308990 Chlamydomonas reinhardtii
Cre06.g283000 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 5292176-5302175 Chlamydomonas reinhardtii
Cre06.g283000 10.0kb downstream 10.0kb downstream 16815 true chromosome_6: 5302176-5318990 Chlamydomonas reinhardtii
Cre06.g283000 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 5308991-5318990 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124085946 5260 Chlorophyte View MSA
123403368 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.007     Low Low
cufflinks 0.344        
cufflinks 0.414       High
cufflinks 0.204        
cufflinks 0.114     Low  
cufflinks 0.185        
cufflinks 0.389       High
cufflinks 0.314        
cufflinks 0.004     Low Low
cufflinks 0.021     Low  
cufflinks 0.109     Low  
cufflinks 0.259        
cufflinks 0.08     Low  
cufflinks 0.159        
cufflinks 0.2        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low Low
cufflinks 0.158     Low  
cufflinks 0.008     Low Low
cufflinks 0.051     Low  
cufflinks 0.054     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.724       High
cufflinks 0.142     Low  
cufflinks 0.005     Low Low
cufflinks 0.214218 0.0 0.470968   Low
cufflinks 0.88047 0.0 2.007    
cufflinks 0.755662 0.0 1.95474    
cufflinks 0.671943 0.0 1.36857    
cufflinks 1.05821 0.0 2.16748   High

0 Strain