Gene : OTU4 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g274700 Defline:  (1 of 2) K13719 - ubiquitin thioesterase OTU1 (OTU1, YOD1)
Genomic Order:  581 Name:  ? Cre06.g274700
Secondary Identifier:  ? PAC:30779785
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g274700 0.5kb upstream 0.5kb upstream 3962 true chromosome_6: 3085646-3089607 Chlamydomonas reinhardtii
Cre06.g274700 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 3085646-3086145 Chlamydomonas reinhardtii
Cre06.g274700 0.5kb downstream 0.5kb downstream 3962 true chromosome_6: 3086146-3090107 Chlamydomonas reinhardtii
Cre06.g274700 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 3089608-3090107 Chlamydomonas reinhardtii
Cre06.g274700 1.0kb upstream 1.0kb upstream 4462 true chromosome_6: 3085146-3089607 Chlamydomonas reinhardtii
Cre06.g274700 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 3085146-3086145 Chlamydomonas reinhardtii
Cre06.g274700 1.0kb downstream 1.0kb downstream 4462 true chromosome_6: 3086146-3090607 Chlamydomonas reinhardtii
Cre06.g274700 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 3089608-3090607 Chlamydomonas reinhardtii
Cre06.g274700 2.0kb upstream 2.0kb upstream 5462 true chromosome_6: 3084146-3089607 Chlamydomonas reinhardtii
Cre06.g274700 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 3084146-3086145 Chlamydomonas reinhardtii
Cre06.g274700 2.0kb downstream 2.0kb downstream 5462 true chromosome_6: 3086146-3091607 Chlamydomonas reinhardtii
Cre06.g274700 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 3089608-3091607 Chlamydomonas reinhardtii
Cre06.g274700 5.0kb upstream 5.0kb upstream 8462 true chromosome_6: 3081146-3089607 Chlamydomonas reinhardtii
Cre06.g274700 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 3081146-3086145 Chlamydomonas reinhardtii
Cre06.g274700 5.0kb downstream 5.0kb downstream 8462 true chromosome_6: 3086146-3094607 Chlamydomonas reinhardtii
Cre06.g274700 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 3089608-3094607 Chlamydomonas reinhardtii
Cre06.g274700 10.0kb upstream 10.0kb upstream 13462 true chromosome_6: 3076146-3089607 Chlamydomonas reinhardtii
Cre06.g274700 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 3076146-3086145 Chlamydomonas reinhardtii
Cre06.g274700 10.0kb downstream 10.0kb downstream 13462 true chromosome_6: 3086146-3099607 Chlamydomonas reinhardtii
Cre06.g274700 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 3089608-3099607 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124078014 5260 Chlorophyte Singleton cluster - no MSA
123395976 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.305        
cufflinks 3.963       High
cufflinks 2.885        
cufflinks 1.968        
cufflinks 3.939       High
cufflinks 3.06        
cufflinks 1.423        
cufflinks 2.5        
cufflinks 3.784        
cufflinks 1.309       Low
cufflinks 1.93        
cufflinks 2.625        
cufflinks 1.522        
cufflinks 4.314       High
cufflinks 1.657        
cufflinks 4.559       High
cufflinks 2.827        
cufflinks 2.532        
cufflinks 0.444       Low
cufflinks 3.669        
cufflinks 1.671        
cufflinks 2.586        
cufflinks 1.593        
cufflinks 2.555        
cufflinks 2.768        
cufflinks 4.01282 0.59131 7.43432   Low
cufflinks 34.2174 8.68994 59.7449 High  
cufflinks 2.10647 0.0 4.89724    
cufflinks 14.0685 1.5784 26.5586   High
cufflinks 16.7209 3.21036 30.2314    

0 Strain