Gene : Cre06.g261750 C. reinhardtii v5.6
Defline:  (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) Genomic Order:  303
Name:  ? Cre06.g261750 Secondary Identifier:  ? PAC:30779217
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g261750 0.5kb upstream 0.5kb upstream 7352 true chromosome_6: 1729760-1737111 Chlamydomonas reinhardtii
Cre06.g261750 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 1729760-1730259 Chlamydomonas reinhardtii
Cre06.g261750 0.5kb downstream 0.5kb downstream 7352 true chromosome_6: 1730260-1737611 Chlamydomonas reinhardtii
Cre06.g261750 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 1737112-1737611 Chlamydomonas reinhardtii
Cre06.g261750 1.0kb upstream 1.0kb upstream 7852 true chromosome_6: 1729260-1737111 Chlamydomonas reinhardtii
Cre06.g261750 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 1729260-1730259 Chlamydomonas reinhardtii
Cre06.g261750 1.0kb downstream 1.0kb downstream 7852 true chromosome_6: 1730260-1738111 Chlamydomonas reinhardtii
Cre06.g261750 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 1737112-1738111 Chlamydomonas reinhardtii
Cre06.g261750 2.0kb upstream 2.0kb upstream 8852 true chromosome_6: 1728260-1737111 Chlamydomonas reinhardtii
Cre06.g261750 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 1728260-1730259 Chlamydomonas reinhardtii
Cre06.g261750 2.0kb downstream 2.0kb downstream 8852 true chromosome_6: 1730260-1739111 Chlamydomonas reinhardtii
Cre06.g261750 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 1737112-1739111 Chlamydomonas reinhardtii
Cre06.g261750 5.0kb upstream 5.0kb upstream 11852 true chromosome_6: 1725260-1737111 Chlamydomonas reinhardtii
Cre06.g261750 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 1725260-1730259 Chlamydomonas reinhardtii
Cre06.g261750 5.0kb downstream 5.0kb downstream 11852 true chromosome_6: 1730260-1742111 Chlamydomonas reinhardtii
Cre06.g261750 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 1737112-1742111 Chlamydomonas reinhardtii
Cre06.g261750 10.0kb upstream 10.0kb upstream 16852 true chromosome_6: 1720260-1737111 Chlamydomonas reinhardtii
Cre06.g261750 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 1720260-1730259 Chlamydomonas reinhardtii
Cre06.g261750 10.0kb downstream 10.0kb downstream 16852 true chromosome_6: 1730260-1747111 Chlamydomonas reinhardtii
Cre06.g261750 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 1737112-1747111 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112765 5260 Chlorophyte View MSA
123427884 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.716        
cufflinks 5.477        
cufflinks 3.72        
cufflinks 5.465        
cufflinks 5.012        
cufflinks 5.885        
cufflinks 3.963        
cufflinks 6.473        
cufflinks 4.75        
cufflinks 1.561       Low
cufflinks 5.516        
cufflinks 8.721       High
cufflinks 3.318        
cufflinks 6.522        
cufflinks 6.589        
cufflinks 6.377        
cufflinks 7.853        
cufflinks 4.404        
cufflinks 0.908       Low
cufflinks 7.84        
cufflinks 5.98        
cufflinks 7.28        
cufflinks 9.069       High
cufflinks 6.916        
cufflinks 8.822       High
cufflinks 25.1821 0.233343 50.1308   High
cufflinks 13.8634 3.75798 23.9689    
cufflinks 14.1654 0.0 28.5463    
cufflinks 9.66464 1.03458 18.2947    
cufflinks 13.9498 2.42349 25.476    

0 Strain