Gene : Cre06.g278300 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR10926//PTHR10926:SF0 - CELL CYCLE CONTROL PROTEIN 50 // PROTEIN CHAT-1, ISOFORM A Genomic Order:  862
Name:  ? Cre06.g278300 Secondary Identifier:  ? PAC:30779896
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g278300 0.5kb upstream 0.5kb upstream 3292 true chromosome_6: 4828652-4831943 Chlamydomonas reinhardtii
Cre06.g278300 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 4831444-4831943 Chlamydomonas reinhardtii
Cre06.g278300 0.5kb downstream 0.5kb downstream 3292 true chromosome_6: 4828152-4831443 Chlamydomonas reinhardtii
Cre06.g278300 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 4828152-4828651 Chlamydomonas reinhardtii
Cre06.g278300 1.0kb upstream 1.0kb upstream 3792 true chromosome_6: 4828652-4832443 Chlamydomonas reinhardtii
Cre06.g278300 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 4831444-4832443 Chlamydomonas reinhardtii
Cre06.g278300 1.0kb downstream 1.0kb downstream 3792 true chromosome_6: 4827652-4831443 Chlamydomonas reinhardtii
Cre06.g278300 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 4827652-4828651 Chlamydomonas reinhardtii
Cre06.g278300 2.0kb upstream 2.0kb upstream 4792 true chromosome_6: 4828652-4833443 Chlamydomonas reinhardtii
Cre06.g278300 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 4831444-4833443 Chlamydomonas reinhardtii
Cre06.g278300 2.0kb downstream 2.0kb downstream 4792 true chromosome_6: 4826652-4831443 Chlamydomonas reinhardtii
Cre06.g278300 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 4826652-4828651 Chlamydomonas reinhardtii
Cre06.g278300 5.0kb upstream 5.0kb upstream 7792 true chromosome_6: 4828652-4836443 Chlamydomonas reinhardtii
Cre06.g278300 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 4831444-4836443 Chlamydomonas reinhardtii
Cre06.g278300 5.0kb downstream 5.0kb downstream 7792 true chromosome_6: 4823652-4831443 Chlamydomonas reinhardtii
Cre06.g278300 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 4823652-4828651 Chlamydomonas reinhardtii
Cre06.g278300 10.0kb upstream 10.0kb upstream 12792 true chromosome_6: 4828652-4841443 Chlamydomonas reinhardtii
Cre06.g278300 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 4831444-4841443 Chlamydomonas reinhardtii
Cre06.g278300 10.0kb downstream 10.0kb downstream 12792 true chromosome_6: 4818652-4831443 Chlamydomonas reinhardtii
Cre06.g278300 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 4818652-4828651 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109537 5260 Chlorophyte View MSA
123425782 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.286     High  
cufflinks 23.088     High  
cufflinks 28.198     High  
cufflinks 33.297     High High
cufflinks 23.929     High  
cufflinks 25.322     High  
cufflinks 28.658     High  
cufflinks 35.908     High High
cufflinks 14.887     High Low
cufflinks 15.104     High Low
cufflinks 29.272     High  
cufflinks 33.33     High High
cufflinks 28.455     High  
cufflinks 24.912     High  
cufflinks 26.28     High  
cufflinks 23.117     High  
cufflinks 19.999     High  
cufflinks 30.116     High  
cufflinks 12.255     High Low
cufflinks 36.024     High High
cufflinks 22.911     High  
cufflinks 16.486     High Low
cufflinks 31.432     High  
cufflinks 34.483     High High
cufflinks 17.087     High Low
cufflinks 86.935 0.0 177.462 High High
cufflinks 54.712 12.7367 96.6872 High  
cufflinks 33.3093 0.0 67.6168 High Low
cufflinks 21.4772 1.67204 41.2824   Low
cufflinks 29.2288 4.58055 53.8771 High Low

0 Strain