Gene : PHC3 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g278162 Defline:  (1 of 70) PF12499 - Pherophorin (DUF3707)
Genomic Order:  721 Name:  ? Cre06.g278162
Secondary Identifier:  ? PAC:30778514
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g278162 0.5kb upstream 0.5kb upstream 3642 true chromosome_6: 3784323-3787964 Chlamydomonas reinhardtii
Cre06.g278162 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 3787465-3787964 Chlamydomonas reinhardtii
Cre06.g278162 0.5kb downstream 0.5kb downstream 3642 true chromosome_6: 3783823-3787464 Chlamydomonas reinhardtii
Cre06.g278162 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 3783823-3784322 Chlamydomonas reinhardtii
Cre06.g278162 1.0kb upstream 1.0kb upstream 4142 true chromosome_6: 3784323-3788464 Chlamydomonas reinhardtii
Cre06.g278162 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 3787465-3788464 Chlamydomonas reinhardtii
Cre06.g278162 1.0kb downstream 1.0kb downstream 4142 true chromosome_6: 3783323-3787464 Chlamydomonas reinhardtii
Cre06.g278162 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 3783323-3784322 Chlamydomonas reinhardtii
Cre06.g278162 2.0kb upstream 2.0kb upstream 5142 true chromosome_6: 3784323-3789464 Chlamydomonas reinhardtii
Cre06.g278162 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 3787465-3789464 Chlamydomonas reinhardtii
Cre06.g278162 2.0kb downstream 2.0kb downstream 5142 true chromosome_6: 3782323-3787464 Chlamydomonas reinhardtii
Cre06.g278162 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 3782323-3784322 Chlamydomonas reinhardtii
Cre06.g278162 5.0kb upstream 5.0kb upstream 8142 true chromosome_6: 3784323-3792464 Chlamydomonas reinhardtii
Cre06.g278162 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 3787465-3792464 Chlamydomonas reinhardtii
Cre06.g278162 5.0kb downstream 5.0kb downstream 8142 true chromosome_6: 3779323-3787464 Chlamydomonas reinhardtii
Cre06.g278162 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 3779323-3784322 Chlamydomonas reinhardtii
Cre06.g278162 10.0kb upstream 10.0kb upstream 13142 true chromosome_6: 3784323-3797464 Chlamydomonas reinhardtii
Cre06.g278162 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 3787465-3797464 Chlamydomonas reinhardtii
Cre06.g278162 10.0kb downstream 10.0kb downstream 13142 true chromosome_6: 3774323-3787464 Chlamydomonas reinhardtii
Cre06.g278162 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 3774323-3784322 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124086756 5260 Chlorophyte View MSA
123404059 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 294.348     High  
cufflinks 415.755     High  
cufflinks 29.941     High Low
cufflinks 59.362     High Low
cufflinks 462.254     High  
cufflinks 371.134     High  
cufflinks 309.968     High  
cufflinks 198.293     High  
cufflinks 387.47     High  
cufflinks 153.994     High  
cufflinks 21.093     High Low
cufflinks 292.278     High  
cufflinks 179.511     High  
cufflinks 452.485     High  
cufflinks 157.218     High  
cufflinks 592.69     High High
cufflinks 397.144     High  
cufflinks 83.827     High  
cufflinks 46.618     High Low
cufflinks 148.052     High  
cufflinks 170.045     High  
cufflinks 487.885     High High
cufflinks 188.749     High  
cufflinks 112.245     High  
cufflinks 481.835     High High
cufflinks 1413.94 286.962 2540.92 High High
cufflinks 550.748 58.5537 1042.94 High  
cufflinks 1042.8 0.0 2227.62 High High
cufflinks 733.245 70.4991 1395.99 High Low
cufflinks 899.832 29.6415 1770.02 High High

0 Strain