Gene : RSP6 C. reinhardtii v5.6
Primary Identifier:  ? Cre05.g242550 Defline:  (1 of 2) PTHR13159 - RADIAL SPOKEHEAD-RELATED
Genomic Order:  217 Name:  ? Cre05.g242550
Secondary Identifier:  ? PAC:30783274
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre05.g242550 0.5kb upstream 0.5kb upstream 4215 true chromosome_5: 1752869-1757083 Chlamydomonas reinhardtii
Cre05.g242550 0.5kb upstream 0.5kb upstream 500 false chromosome_5: 1756584-1757083 Chlamydomonas reinhardtii
Cre05.g242550 0.5kb downstream 0.5kb downstream 4215 true chromosome_5: 1752369-1756583 Chlamydomonas reinhardtii
Cre05.g242550 0.5kb downstream 0.5kb downstream 500 false chromosome_5: 1752369-1752868 Chlamydomonas reinhardtii
Cre05.g242550 1.0kb upstream 1.0kb upstream 4715 true chromosome_5: 1752869-1757583 Chlamydomonas reinhardtii
Cre05.g242550 1.0kb upstream 1.0kb upstream 1000 false chromosome_5: 1756584-1757583 Chlamydomonas reinhardtii
Cre05.g242550 1.0kb downstream 1.0kb downstream 4715 true chromosome_5: 1751869-1756583 Chlamydomonas reinhardtii
Cre05.g242550 1.0kb downstream 1.0kb downstream 1000 false chromosome_5: 1751869-1752868 Chlamydomonas reinhardtii
Cre05.g242550 2.0kb upstream 2.0kb upstream 5715 true chromosome_5: 1752869-1758583 Chlamydomonas reinhardtii
Cre05.g242550 2.0kb upstream 2.0kb upstream 2000 false chromosome_5: 1756584-1758583 Chlamydomonas reinhardtii
Cre05.g242550 2.0kb downstream 2.0kb downstream 5715 true chromosome_5: 1750869-1756583 Chlamydomonas reinhardtii
Cre05.g242550 2.0kb downstream 2.0kb downstream 2000 false chromosome_5: 1750869-1752868 Chlamydomonas reinhardtii
Cre05.g242550 5.0kb upstream 5.0kb upstream 8715 true chromosome_5: 1752869-1761583 Chlamydomonas reinhardtii
Cre05.g242550 5.0kb upstream 5.0kb upstream 5000 false chromosome_5: 1756584-1761583 Chlamydomonas reinhardtii
Cre05.g242550 5.0kb downstream 5.0kb downstream 8715 true chromosome_5: 1747869-1756583 Chlamydomonas reinhardtii
Cre05.g242550 5.0kb downstream 5.0kb downstream 5000 false chromosome_5: 1747869-1752868 Chlamydomonas reinhardtii
Cre05.g242550 10.0kb upstream 10.0kb upstream 13715 true chromosome_5: 1752869-1766583 Chlamydomonas reinhardtii
Cre05.g242550 10.0kb upstream 10.0kb upstream 10000 false chromosome_5: 1756584-1766583 Chlamydomonas reinhardtii
Cre05.g242550 10.0kb downstream 10.0kb downstream 13715 true chromosome_5: 1742869-1756583 Chlamydomonas reinhardtii
Cre05.g242550 10.0kb downstream 10.0kb downstream 10000 false chromosome_5: 1742869-1752868 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109595 5260 Chlorophyte View MSA
123427233 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.369       Low
cufflinks 9.194        
cufflinks 18.221     High High
cufflinks 24.92     High High
cufflinks 6.544        
cufflinks 7.313        
cufflinks 6.694        
cufflinks 12.884        
cufflinks 1.753       Low
cufflinks 3.478        
cufflinks 37.491     High High
cufflinks 9.058        
cufflinks 5.053        
cufflinks 6.88        
cufflinks 17.249     High High
cufflinks 2.075       Low
cufflinks 3.035        
cufflinks 11.042        
cufflinks 2.4       Low
cufflinks 8.469        
cufflinks 15.039     High  
cufflinks 3.144        
cufflinks 6.291        
cufflinks 13.28        
cufflinks 2.046       Low
cufflinks 8.99124 1.22911 16.7534   High
cufflinks 14.5497 3.97236 25.127    
cufflinks 17.3989 0.0 35.0525    
cufflinks 9.88604 1.24982 18.5223    
cufflinks 16.5832 2.93234 30.2341    

0 Strain