Gene : Cre05.g240900 C. reinhardtii v5.6
Defline:  (1 of 7) PTHR11339//PTHR11339:SF290 - EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED // PROTEIN T26A8.1 Genomic Order:  456
Name:  ? Cre05.g240900 Secondary Identifier:  ? PAC:30783172
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre05.g240900 0.5kb upstream 0.5kb upstream 12776 true chromosome_5: 3372844-3385619 Chlamydomonas reinhardtii
Cre05.g240900 0.5kb upstream 0.5kb upstream 500 false chromosome_5: 3385120-3385619 Chlamydomonas reinhardtii
Cre05.g240900 0.5kb downstream 0.5kb downstream 12776 true chromosome_5: 3372344-3385119 Chlamydomonas reinhardtii
Cre05.g240900 0.5kb downstream 0.5kb downstream 500 false chromosome_5: 3372344-3372843 Chlamydomonas reinhardtii
Cre05.g240900 1.0kb upstream 1.0kb upstream 13276 true chromosome_5: 3372844-3386119 Chlamydomonas reinhardtii
Cre05.g240900 1.0kb upstream 1.0kb upstream 1000 false chromosome_5: 3385120-3386119 Chlamydomonas reinhardtii
Cre05.g240900 1.0kb downstream 1.0kb downstream 13276 true chromosome_5: 3371844-3385119 Chlamydomonas reinhardtii
Cre05.g240900 1.0kb downstream 1.0kb downstream 1000 false chromosome_5: 3371844-3372843 Chlamydomonas reinhardtii
Cre05.g240900 2.0kb upstream 2.0kb upstream 14276 true chromosome_5: 3372844-3387119 Chlamydomonas reinhardtii
Cre05.g240900 2.0kb upstream 2.0kb upstream 2000 false chromosome_5: 3385120-3387119 Chlamydomonas reinhardtii
Cre05.g240900 2.0kb downstream 2.0kb downstream 14276 true chromosome_5: 3370844-3385119 Chlamydomonas reinhardtii
Cre05.g240900 2.0kb downstream 2.0kb downstream 2000 false chromosome_5: 3370844-3372843 Chlamydomonas reinhardtii
Cre05.g240900 5.0kb upstream 5.0kb upstream 17276 true chromosome_5: 3372844-3390119 Chlamydomonas reinhardtii
Cre05.g240900 5.0kb upstream 5.0kb upstream 5000 false chromosome_5: 3385120-3390119 Chlamydomonas reinhardtii
Cre05.g240900 5.0kb downstream 5.0kb downstream 17276 true chromosome_5: 3367844-3385119 Chlamydomonas reinhardtii
Cre05.g240900 5.0kb downstream 5.0kb downstream 5000 false chromosome_5: 3367844-3372843 Chlamydomonas reinhardtii
Cre05.g240900 10.0kb upstream 10.0kb upstream 22276 true chromosome_5: 3372844-3395119 Chlamydomonas reinhardtii
Cre05.g240900 10.0kb upstream 10.0kb upstream 10000 false chromosome_5: 3385120-3395119 Chlamydomonas reinhardtii
Cre05.g240900 10.0kb downstream 10.0kb downstream 22276 true chromosome_5: 3362844-3385119 Chlamydomonas reinhardtii
Cre05.g240900 10.0kb downstream 10.0kb downstream 10000 false chromosome_5: 3362844-3372843 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124077552 5260 Chlorophyte View MSA
123395552 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.466        
cufflinks 1.385        
cufflinks 1.697        
cufflinks 2.728       High
cufflinks 0.798        
cufflinks 0.879        
cufflinks 0.989        
cufflinks 1.459        
cufflinks 0.345       Low
cufflinks 0.127       Low
cufflinks 3.624       High
cufflinks 1.596        
cufflinks 0.143       Low
cufflinks 1.023        
cufflinks 1.927        
cufflinks 0.502        
cufflinks 1.253        
cufflinks 1.09        
cufflinks 0.184       Low
cufflinks 1.29        
cufflinks 1.775        
cufflinks 1.568        
cufflinks 0.873        
cufflinks 1.309        
cufflinks 0.923        
cufflinks 1.88063 0.278604 3.48266   High
cufflinks 10.4839 2.80887 18.1589    
cufflinks 13.0865 0.0 28.6653    
cufflinks 5.57827 0.309049 10.8475   High
cufflinks 10.4427 1.50562 19.3798   Low

0 Strain