Gene : BBS2 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g257250 Defline:  (1 of 1) K16747 - Bardet-Biedl syndrome 2 protein (BBS2)
Genomic Order:  203 Name:  ? Cre06.g257250
Secondary Identifier:  ? PAC:30779676
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g257250 0.5kb upstream 0.5kb upstream 8168 true chromosome_6: 1161130-1169297 Chlamydomonas reinhardtii
Cre06.g257250 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 1168798-1169297 Chlamydomonas reinhardtii
Cre06.g257250 0.5kb downstream 0.5kb downstream 8168 true chromosome_6: 1160630-1168797 Chlamydomonas reinhardtii
Cre06.g257250 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 1160630-1161129 Chlamydomonas reinhardtii
Cre06.g257250 1.0kb upstream 1.0kb upstream 8668 true chromosome_6: 1161130-1169797 Chlamydomonas reinhardtii
Cre06.g257250 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 1168798-1169797 Chlamydomonas reinhardtii
Cre06.g257250 1.0kb downstream 1.0kb downstream 8668 true chromosome_6: 1160130-1168797 Chlamydomonas reinhardtii
Cre06.g257250 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 1160130-1161129 Chlamydomonas reinhardtii
Cre06.g257250 2.0kb upstream 2.0kb upstream 9668 true chromosome_6: 1161130-1170797 Chlamydomonas reinhardtii
Cre06.g257250 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 1168798-1170797 Chlamydomonas reinhardtii
Cre06.g257250 2.0kb downstream 2.0kb downstream 9668 true chromosome_6: 1159130-1168797 Chlamydomonas reinhardtii
Cre06.g257250 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 1159130-1161129 Chlamydomonas reinhardtii
Cre06.g257250 5.0kb upstream 5.0kb upstream 12668 true chromosome_6: 1161130-1173797 Chlamydomonas reinhardtii
Cre06.g257250 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 1168798-1173797 Chlamydomonas reinhardtii
Cre06.g257250 5.0kb downstream 5.0kb downstream 12668 true chromosome_6: 1156130-1168797 Chlamydomonas reinhardtii
Cre06.g257250 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 1156130-1161129 Chlamydomonas reinhardtii
Cre06.g257250 10.0kb upstream 10.0kb upstream 17668 true chromosome_6: 1161130-1178797 Chlamydomonas reinhardtii
Cre06.g257250 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 1168798-1178797 Chlamydomonas reinhardtii
Cre06.g257250 10.0kb downstream 10.0kb downstream 17668 true chromosome_6: 1151130-1168797 Chlamydomonas reinhardtii
Cre06.g257250 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 1151130-1161129 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110174 5260 Chlorophyte View MSA
123423053 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.946       Low
cufflinks 3.173        
cufflinks 4.404        
cufflinks 5.747       High
cufflinks 2.73        
cufflinks 3.065        
cufflinks 3.425        
cufflinks 5.011       High
cufflinks 1.153       Low
cufflinks 1.447       Low
cufflinks 5.9       High
cufflinks 3.934        
cufflinks 2.329        
cufflinks 3.325        
cufflinks 4.076        
cufflinks 1.705       Low
cufflinks 2.493        
cufflinks 3.341        
cufflinks 1.415       Low
cufflinks 4.947       High
cufflinks 4.171        
cufflinks 1.897        
cufflinks 3.855        
cufflinks 4.514        
cufflinks 2.078        
cufflinks 7.49482 0.958934 14.0307   High
cufflinks 8.45863 2.27399 14.6433    
cufflinks 10.201 0.0 20.5007    
cufflinks 7.91604 0.964793 14.8673    
cufflinks 12.5882 2.27307 22.9032    

0 Strain