Gene : FAP119 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g256450 Defline:  (1 of 2) PF14769 - Flagellar C1a complex subunit C1a-32 (CLAMP)
Genomic Order:  184 Name:  ? Cre06.g256450
Secondary Identifier:  ? PAC:30780118
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g256450 0.5kb upstream 0.5kb upstream 3122 true chromosome_6: 1057846-1060967 Chlamydomonas reinhardtii
Cre06.g256450 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 1057846-1058345 Chlamydomonas reinhardtii
Cre06.g256450 0.5kb downstream 0.5kb downstream 3122 true chromosome_6: 1058346-1061467 Chlamydomonas reinhardtii
Cre06.g256450 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 1060968-1061467 Chlamydomonas reinhardtii
Cre06.g256450 1.0kb upstream 1.0kb upstream 3622 true chromosome_6: 1057346-1060967 Chlamydomonas reinhardtii
Cre06.g256450 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 1057346-1058345 Chlamydomonas reinhardtii
Cre06.g256450 1.0kb downstream 1.0kb downstream 3622 true chromosome_6: 1058346-1061967 Chlamydomonas reinhardtii
Cre06.g256450 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 1060968-1061967 Chlamydomonas reinhardtii
Cre06.g256450 2.0kb upstream 2.0kb upstream 4622 true chromosome_6: 1056346-1060967 Chlamydomonas reinhardtii
Cre06.g256450 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 1056346-1058345 Chlamydomonas reinhardtii
Cre06.g256450 2.0kb downstream 2.0kb downstream 4622 true chromosome_6: 1058346-1062967 Chlamydomonas reinhardtii
Cre06.g256450 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 1060968-1062967 Chlamydomonas reinhardtii
Cre06.g256450 5.0kb upstream 5.0kb upstream 7622 true chromosome_6: 1053346-1060967 Chlamydomonas reinhardtii
Cre06.g256450 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 1053346-1058345 Chlamydomonas reinhardtii
Cre06.g256450 5.0kb downstream 5.0kb downstream 7622 true chromosome_6: 1058346-1065967 Chlamydomonas reinhardtii
Cre06.g256450 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 1060968-1065967 Chlamydomonas reinhardtii
Cre06.g256450 10.0kb upstream 10.0kb upstream 12622 true chromosome_6: 1048346-1060967 Chlamydomonas reinhardtii
Cre06.g256450 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 1048346-1058345 Chlamydomonas reinhardtii
Cre06.g256450 10.0kb downstream 10.0kb downstream 12622 true chromosome_6: 1058346-1070967 Chlamydomonas reinhardtii
Cre06.g256450 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 1060968-1070967 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111135 5260 Chlorophyte View MSA
123423224 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.472       Low
cufflinks 4.228        
cufflinks 9.155       High
cufflinks 12.357       High
cufflinks 3.614        
cufflinks 3.013        
cufflinks 3.687        
cufflinks 5.57        
cufflinks 1.625       Low
cufflinks 1.694       Low
cufflinks 19.845     High High
cufflinks 5.331        
cufflinks 2.648        
cufflinks 3.521        
cufflinks 10.583       High
cufflinks 1.993        
cufflinks 2.107        
cufflinks 5.131        
cufflinks 1.778       Low
cufflinks 3.653        
cufflinks 7.732        
cufflinks 1.532       Low
cufflinks 3.872        
cufflinks 6.85        
cufflinks 1.508       Low
cufflinks 2.37053 0.177692 4.56336    
cufflinks 4.27286 0.590394 7.95534    
cufflinks 8.53026 0.0 17.2677    
cufflinks 3.65689 0.47966 6.83412    
cufflinks 5.77345 0.922524 10.6244    

0 Strain