Gene : IFT43 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g251200 Defline:  (1 of 1) PTHR33724//PTHR33724:SF1 - FAMILY NOT NAMED // INTRAFLAGELLAR TRANSPORT PROTEIN 43 HOMOLOG
Genomic Order:  54 Name:  ? Cre06.g251200
Secondary Identifier:  ? PAC:30778433
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g251200 0.5kb upstream 0.5kb upstream 2859 true chromosome_6: 307015-309873 Chlamydomonas reinhardtii
Cre06.g251200 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 307015-307514 Chlamydomonas reinhardtii
Cre06.g251200 0.5kb downstream 0.5kb downstream 2859 true chromosome_6: 307515-310373 Chlamydomonas reinhardtii
Cre06.g251200 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 309874-310373 Chlamydomonas reinhardtii
Cre06.g251200 1.0kb upstream 1.0kb upstream 3359 true chromosome_6: 306515-309873 Chlamydomonas reinhardtii
Cre06.g251200 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 306515-307514 Chlamydomonas reinhardtii
Cre06.g251200 1.0kb downstream 1.0kb downstream 3359 true chromosome_6: 307515-310873 Chlamydomonas reinhardtii
Cre06.g251200 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 309874-310873 Chlamydomonas reinhardtii
Cre06.g251200 2.0kb upstream 2.0kb upstream 4359 true chromosome_6: 305515-309873 Chlamydomonas reinhardtii
Cre06.g251200 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 305515-307514 Chlamydomonas reinhardtii
Cre06.g251200 2.0kb downstream 2.0kb downstream 4359 true chromosome_6: 307515-311873 Chlamydomonas reinhardtii
Cre06.g251200 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 309874-311873 Chlamydomonas reinhardtii
Cre06.g251200 5.0kb upstream 5.0kb upstream 7359 true chromosome_6: 302515-309873 Chlamydomonas reinhardtii
Cre06.g251200 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 302515-307514 Chlamydomonas reinhardtii
Cre06.g251200 5.0kb downstream 5.0kb downstream 7359 true chromosome_6: 307515-314873 Chlamydomonas reinhardtii
Cre06.g251200 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 309874-314873 Chlamydomonas reinhardtii
Cre06.g251200 10.0kb upstream 10.0kb upstream 12359 true chromosome_6: 297515-309873 Chlamydomonas reinhardtii
Cre06.g251200 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 297515-307514 Chlamydomonas reinhardtii
Cre06.g251200 10.0kb downstream 10.0kb downstream 12359 true chromosome_6: 307515-319873 Chlamydomonas reinhardtii
Cre06.g251200 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 309874-319873 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080349 5260 Chlorophyte View MSA
123398136 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.479       Low
cufflinks 14.444     High  
cufflinks 20.014     High High
cufflinks 23.24     High High
cufflinks 10.473        
cufflinks 11.501        
cufflinks 11.247        
cufflinks 16.873     High  
cufflinks 2.945       Low
cufflinks 5.28        
cufflinks 23.189     High High
cufflinks 12.429        
cufflinks 6.558        
cufflinks 12.643        
cufflinks 17.36     High  
cufflinks 4.266       Low
cufflinks 4.781       Low
cufflinks 14.361     High  
cufflinks 5.935     High  
cufflinks 13.955     High  
cufflinks 15.507     High  
cufflinks 3.605       Low
cufflinks 12.22        
cufflinks 12.191        
cufflinks 2.871       Low
cufflinks 8.89988 1.4869 16.3129   High
cufflinks 18.0744 4.91521 31.2336    
cufflinks 14.9322 0.0 30.0311    
cufflinks 15.1787 1.91323 28.4441   High
cufflinks 12.5142 2.51396 22.5145    

0 Strain