Gene : UBC2 C. reinhardtii v5.6
Primary Identifier:  ? Cre05.g247600 Defline:  (1 of 1) PTHR24067//PTHR24067:SF46 - UBIQUITIN-CONJUGATING ENZYME E2 // LD28904P
Genomic Order:  100 Name:  ? Cre05.g247600
Secondary Identifier:  ? PAC:30783043
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-7511 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre05.g247600 0.5kb upstream 0.5kb upstream 2514 true chromosome_5: 876169-878682 Chlamydomonas reinhardtii
Cre05.g247600 0.5kb upstream 0.5kb upstream 500 false chromosome_5: 878183-878682 Chlamydomonas reinhardtii
Cre05.g247600 0.5kb downstream 0.5kb downstream 2514 true chromosome_5: 875669-878182 Chlamydomonas reinhardtii
Cre05.g247600 0.5kb downstream 0.5kb downstream 500 false chromosome_5: 875669-876168 Chlamydomonas reinhardtii
Cre05.g247600 1.0kb upstream 1.0kb upstream 3014 true chromosome_5: 876169-879182 Chlamydomonas reinhardtii
Cre05.g247600 1.0kb upstream 1.0kb upstream 1000 false chromosome_5: 878183-879182 Chlamydomonas reinhardtii
Cre05.g247600 1.0kb downstream 1.0kb downstream 3014 true chromosome_5: 875169-878182 Chlamydomonas reinhardtii
Cre05.g247600 1.0kb downstream 1.0kb downstream 1000 false chromosome_5: 875169-876168 Chlamydomonas reinhardtii
Cre05.g247600 2.0kb upstream 2.0kb upstream 4014 true chromosome_5: 876169-880182 Chlamydomonas reinhardtii
Cre05.g247600 2.0kb upstream 2.0kb upstream 2000 false chromosome_5: 878183-880182 Chlamydomonas reinhardtii
Cre05.g247600 2.0kb downstream 2.0kb downstream 4014 true chromosome_5: 874169-878182 Chlamydomonas reinhardtii
Cre05.g247600 2.0kb downstream 2.0kb downstream 2000 false chromosome_5: 874169-876168 Chlamydomonas reinhardtii
Cre05.g247600 5.0kb upstream 5.0kb upstream 7014 true chromosome_5: 876169-883182 Chlamydomonas reinhardtii
Cre05.g247600 5.0kb upstream 5.0kb upstream 5000 false chromosome_5: 878183-883182 Chlamydomonas reinhardtii
Cre05.g247600 5.0kb downstream 5.0kb downstream 7014 true chromosome_5: 871169-878182 Chlamydomonas reinhardtii
Cre05.g247600 5.0kb downstream 5.0kb downstream 5000 false chromosome_5: 871169-876168 Chlamydomonas reinhardtii
Cre05.g247600 10.0kb upstream 10.0kb upstream 12014 true chromosome_5: 876169-888182 Chlamydomonas reinhardtii
Cre05.g247600 10.0kb upstream 10.0kb upstream 10000 false chromosome_5: 878183-888182 Chlamydomonas reinhardtii
Cre05.g247600 10.0kb downstream 10.0kb downstream 12014 true chromosome_5: 866169-878182 Chlamydomonas reinhardtii
Cre05.g247600 10.0kb downstream 10.0kb downstream 10000 false chromosome_5: 866169-876168 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109342 5260 Chlorophyte View MSA
123425410 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 90.185     High  
cufflinks 98.257     High  
cufflinks 108.65     High  
cufflinks 84.506     High  
cufflinks 99.42     High  
cufflinks 99.807     High  
cufflinks 100.984     High  
cufflinks 80.49     High  
cufflinks 83.955     High  
cufflinks 115.076     High High
cufflinks 68.665     High  
cufflinks 74.039     High  
cufflinks 116.133     High High
cufflinks 103.58     High  
cufflinks 71.373     High  
cufflinks 88.2     High  
cufflinks 36.953     High Low
cufflinks 112.356     High High
cufflinks 56.055     High  
cufflinks 53.287     High Low
cufflinks 69.235     High  
cufflinks 41.579     High Low
cufflinks 89.214     High  
cufflinks 71.485     High  
cufflinks 36.682     High Low
cufflinks 98.0211 0.0 200.752 High High
cufflinks 76.6249 14.3689 138.881 High  
cufflinks 46.2731 0.0 95.061 High Low
cufflinks 47.4445 0.0 95.4677 High Low
cufflinks 51.4344 4.77485 98.094 High  

0 Strain