Gene : CAH1 C. reinhardtii v5.6
Primary Identifier:  ? Cre04.g223100 Defline:  (1 of 2) PTHR18952:SF104 - CARBONIC ANHYDRASE-RELATED PROTEIN
Genomic Order:  357 Name:  ? Cre04.g223100
Secondary Identifier:  ? PAC:30791364
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-241 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7115 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7117 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWYQT-4429 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g223100 0.5kb upstream 0.5kb upstream 4751 true chromosome_4: 2662125-2666875 Chlamydomonas reinhardtii
Cre04.g223100 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 2666376-2666875 Chlamydomonas reinhardtii
Cre04.g223100 0.5kb downstream 0.5kb downstream 4751 true chromosome_4: 2661625-2666375 Chlamydomonas reinhardtii
Cre04.g223100 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 2661625-2662124 Chlamydomonas reinhardtii
Cre04.g223100 1.0kb upstream 1.0kb upstream 5251 true chromosome_4: 2662125-2667375 Chlamydomonas reinhardtii
Cre04.g223100 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 2666376-2667375 Chlamydomonas reinhardtii
Cre04.g223100 1.0kb downstream 1.0kb downstream 5251 true chromosome_4: 2661125-2666375 Chlamydomonas reinhardtii
Cre04.g223100 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 2661125-2662124 Chlamydomonas reinhardtii
Cre04.g223100 2.0kb upstream 2.0kb upstream 6251 true chromosome_4: 2662125-2668375 Chlamydomonas reinhardtii
Cre04.g223100 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 2666376-2668375 Chlamydomonas reinhardtii
Cre04.g223100 2.0kb downstream 2.0kb downstream 6251 true chromosome_4: 2660125-2666375 Chlamydomonas reinhardtii
Cre04.g223100 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 2660125-2662124 Chlamydomonas reinhardtii
Cre04.g223100 5.0kb upstream 5.0kb upstream 9251 true chromosome_4: 2662125-2671375 Chlamydomonas reinhardtii
Cre04.g223100 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 2666376-2671375 Chlamydomonas reinhardtii
Cre04.g223100 5.0kb downstream 5.0kb downstream 9251 true chromosome_4: 2657125-2666375 Chlamydomonas reinhardtii
Cre04.g223100 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 2657125-2662124 Chlamydomonas reinhardtii
Cre04.g223100 10.0kb upstream 10.0kb upstream 14251 true chromosome_4: 2662125-2676375 Chlamydomonas reinhardtii
Cre04.g223100 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 2666376-2676375 Chlamydomonas reinhardtii
Cre04.g223100 10.0kb downstream 10.0kb downstream 14251 true chromosome_4: 2652125-2666375 Chlamydomonas reinhardtii
Cre04.g223100 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 2652125-2662124 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098916 5260 Chlorophyte View MSA
123414368 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 412.386     High  
cufflinks 60.66     High  
cufflinks 978.191     High  
cufflinks 2110.38     High  
cufflinks 212.018     High  
cufflinks 551.921     High  
cufflinks 3.016       Low
cufflinks 2211.22     High  
cufflinks 341.194     High  
cufflinks 1.753       Low
cufflinks 1182.5     High  
cufflinks 1561.12     High  
cufflinks 793.042     High  
cufflinks 41.489     High  
cufflinks 1335.39     High  
cufflinks 256.257     High  
cufflinks 3009.09     High  
cufflinks 1401.96     High  
cufflinks 3.604       Low
cufflinks 1.137       Low
cufflinks 1214.9     High  
cufflinks 2584.95     High  
cufflinks 0.985       Low
cufflinks 1696.29     High  
cufflinks 3401.07     High  
cufflinks 7.69304 1.29681 14.0893   High
cufflinks 470.424 54.0665 886.781 High  
cufflinks 542.521 0.0 1153.2 High  
cufflinks 11.6554 1.63622 21.6746   High
cufflinks 3.43203 0.314019 6.55004   Low

0 Strain