Gene : IFT52 C. reinhardtii v5.6
Primary Identifier:  ? Cre04.g219250 Defline:  (1 of 1) PTHR12969 - NGD5/OSM-6/IFT52
Genomic Order:  269 Name:  ? Cre04.g219250
Secondary Identifier:  ? PAC:30791184
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g219250 0.5kb upstream 0.5kb upstream 4333 true chromosome_4: 2092596-2096928 Chlamydomonas reinhardtii
Cre04.g219250 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 2092596-2093095 Chlamydomonas reinhardtii
Cre04.g219250 0.5kb downstream 0.5kb downstream 4333 true chromosome_4: 2093096-2097428 Chlamydomonas reinhardtii
Cre04.g219250 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 2096929-2097428 Chlamydomonas reinhardtii
Cre04.g219250 1.0kb upstream 1.0kb upstream 4833 true chromosome_4: 2092096-2096928 Chlamydomonas reinhardtii
Cre04.g219250 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 2092096-2093095 Chlamydomonas reinhardtii
Cre04.g219250 1.0kb downstream 1.0kb downstream 4833 true chromosome_4: 2093096-2097928 Chlamydomonas reinhardtii
Cre04.g219250 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 2096929-2097928 Chlamydomonas reinhardtii
Cre04.g219250 2.0kb upstream 2.0kb upstream 5833 true chromosome_4: 2091096-2096928 Chlamydomonas reinhardtii
Cre04.g219250 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 2091096-2093095 Chlamydomonas reinhardtii
Cre04.g219250 2.0kb downstream 2.0kb downstream 5833 true chromosome_4: 2093096-2098928 Chlamydomonas reinhardtii
Cre04.g219250 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 2096929-2098928 Chlamydomonas reinhardtii
Cre04.g219250 5.0kb upstream 5.0kb upstream 8833 true chromosome_4: 2088096-2096928 Chlamydomonas reinhardtii
Cre04.g219250 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 2088096-2093095 Chlamydomonas reinhardtii
Cre04.g219250 5.0kb downstream 5.0kb downstream 8833 true chromosome_4: 2093096-2101928 Chlamydomonas reinhardtii
Cre04.g219250 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 2096929-2101928 Chlamydomonas reinhardtii
Cre04.g219250 10.0kb upstream 10.0kb upstream 13833 true chromosome_4: 2083096-2096928 Chlamydomonas reinhardtii
Cre04.g219250 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 2083096-2093095 Chlamydomonas reinhardtii
Cre04.g219250 10.0kb downstream 10.0kb downstream 13833 true chromosome_4: 2093096-2106928 Chlamydomonas reinhardtii
Cre04.g219250 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 2096929-2106928 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109548 5260 Chlorophyte View MSA
123422961 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.583       Low
cufflinks 26.698     High  
cufflinks 41.289     High High
cufflinks 61.047     High High
cufflinks 17.594     High  
cufflinks 20.064     High  
cufflinks 18.219     High  
cufflinks 33.022     High  
cufflinks 6.234       Low
cufflinks 8.011     High Low
cufflinks 74.09     High High
cufflinks 24.883     High  
cufflinks 9.044        
cufflinks 22.401     High  
cufflinks 39.609     High High
cufflinks 7.077       Low
cufflinks 11.389        
cufflinks 28.113     High  
cufflinks 6.624     High Low
cufflinks 22.61     High  
cufflinks 36.186     High  
cufflinks 8.911        
cufflinks 18.662     High  
cufflinks 29.922     High  
cufflinks 7.006       Low
cufflinks 10.4148 1.15195 19.6777 High High
cufflinks 39.352 9.35222 69.3517 High  
cufflinks 41.1093 0.0 84.6762 High  
cufflinks 25.3457 0.488693 50.2027 High High
cufflinks 29.0123 3.9515 54.0732 High Low

0 Strain