Gene : FAP57 C. reinhardtii v5.6
Primary Identifier:  ? Cre04.g217914 Defline:  (1 of 5) KOG2106 - Uncharacterized conserved protein, contains HELP and WD40 domains
Genomic Order:  54 Name:  ? Cre04.g217914
Secondary Identifier:  ? PAC:30791574
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g217914 0.5kb upstream 0.5kb upstream 12282 true chromosome_4: 370047-382328 Chlamydomonas reinhardtii
Cre04.g217914 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 370047-370546 Chlamydomonas reinhardtii
Cre04.g217914 0.5kb downstream 0.5kb downstream 12282 true chromosome_4: 370547-382828 Chlamydomonas reinhardtii
Cre04.g217914 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 382329-382828 Chlamydomonas reinhardtii
Cre04.g217914 1.0kb upstream 1.0kb upstream 12782 true chromosome_4: 369547-382328 Chlamydomonas reinhardtii
Cre04.g217914 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 369547-370546 Chlamydomonas reinhardtii
Cre04.g217914 1.0kb downstream 1.0kb downstream 12782 true chromosome_4: 370547-383328 Chlamydomonas reinhardtii
Cre04.g217914 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 382329-383328 Chlamydomonas reinhardtii
Cre04.g217914 2.0kb upstream 2.0kb upstream 13782 true chromosome_4: 368547-382328 Chlamydomonas reinhardtii
Cre04.g217914 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 368547-370546 Chlamydomonas reinhardtii
Cre04.g217914 2.0kb downstream 2.0kb downstream 13782 true chromosome_4: 370547-384328 Chlamydomonas reinhardtii
Cre04.g217914 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 382329-384328 Chlamydomonas reinhardtii
Cre04.g217914 5.0kb upstream 5.0kb upstream 16782 true chromosome_4: 365547-382328 Chlamydomonas reinhardtii
Cre04.g217914 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 365547-370546 Chlamydomonas reinhardtii
Cre04.g217914 5.0kb downstream 5.0kb downstream 16782 true chromosome_4: 370547-387328 Chlamydomonas reinhardtii
Cre04.g217914 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 382329-387328 Chlamydomonas reinhardtii
Cre04.g217914 10.0kb upstream 10.0kb upstream 21782 true chromosome_4: 360547-382328 Chlamydomonas reinhardtii
Cre04.g217914 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 360547-370546 Chlamydomonas reinhardtii
Cre04.g217914 10.0kb downstream 10.0kb downstream 21782 true chromosome_4: 370547-392328 Chlamydomonas reinhardtii
Cre04.g217914 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 382329-392328 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112091 5260 Chlorophyte View MSA
123427107 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.334       Low
cufflinks 1.632        
cufflinks 2.4        
cufflinks 3.921       High
cufflinks 1.12        
cufflinks 1.002        
cufflinks 1.634        
cufflinks 1.822        
cufflinks 0.325       Low
cufflinks 0.183       Low
cufflinks 6.28       High
cufflinks 1.912        
cufflinks 0.245       Low
cufflinks 1.233        
cufflinks 2.361        
cufflinks 0.376       Low
cufflinks 0.645        
cufflinks 1.432        
cufflinks 0.304       Low
cufflinks 2.063        
cufflinks 2.581        
cufflinks 0.387       Low
cufflinks 1.574        
cufflinks 1.81        
cufflinks 0.298       Low
cufflinks 2.77095 0.0498033 5.4921   High
cufflinks 8.99621 2.3919 15.6005    
cufflinks 8.64251 0.0 18.9803    
cufflinks 6.44529 0.0 13.256    
cufflinks 14.3079 0.00488169 28.611    

0 Strain