Gene : FAP339 C. reinhardtii v5.6
Primary Identifier:  ? Cre04.g216203 Defline:  Flagellar Associated Protein 339
Genomic Order:  135 Name:  ? Cre04.g216203
Secondary Identifier:  ? PAC:30791167
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g216203 0.5kb upstream 0.5kb upstream 4406 true chromosome_4: 1089130-1093535 Chlamydomonas reinhardtii
Cre04.g216203 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 1093036-1093535 Chlamydomonas reinhardtii
Cre04.g216203 0.5kb downstream 0.5kb downstream 4406 true chromosome_4: 1088630-1093035 Chlamydomonas reinhardtii
Cre04.g216203 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 1088630-1089129 Chlamydomonas reinhardtii
Cre04.g216203 1.0kb upstream 1.0kb upstream 4906 true chromosome_4: 1089130-1094035 Chlamydomonas reinhardtii
Cre04.g216203 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 1093036-1094035 Chlamydomonas reinhardtii
Cre04.g216203 1.0kb downstream 1.0kb downstream 4906 true chromosome_4: 1088130-1093035 Chlamydomonas reinhardtii
Cre04.g216203 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 1088130-1089129 Chlamydomonas reinhardtii
Cre04.g216203 2.0kb upstream 2.0kb upstream 5906 true chromosome_4: 1089130-1095035 Chlamydomonas reinhardtii
Cre04.g216203 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 1093036-1095035 Chlamydomonas reinhardtii
Cre04.g216203 2.0kb downstream 2.0kb downstream 5906 true chromosome_4: 1087130-1093035 Chlamydomonas reinhardtii
Cre04.g216203 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 1087130-1089129 Chlamydomonas reinhardtii
Cre04.g216203 5.0kb upstream 5.0kb upstream 8906 true chromosome_4: 1089130-1098035 Chlamydomonas reinhardtii
Cre04.g216203 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 1093036-1098035 Chlamydomonas reinhardtii
Cre04.g216203 5.0kb downstream 5.0kb downstream 8906 true chromosome_4: 1084130-1093035 Chlamydomonas reinhardtii
Cre04.g216203 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 1084130-1089129 Chlamydomonas reinhardtii
Cre04.g216203 10.0kb upstream 10.0kb upstream 13906 true chromosome_4: 1089130-1103035 Chlamydomonas reinhardtii
Cre04.g216203 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 1093036-1103035 Chlamydomonas reinhardtii
Cre04.g216203 10.0kb downstream 10.0kb downstream 13906 true chromosome_4: 1079130-1093035 Chlamydomonas reinhardtii
Cre04.g216203 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 1079130-1089129 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110778 5260 Chlorophyte View MSA
123423135 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.042     Low  
cufflinks 0.123     Low  
cufflinks 0.275        
cufflinks 0.37       High
cufflinks 0.01     Low Low
cufflinks 0.099     Low  
cufflinks 0.202     Low  
cufflinks 0.183     Low  
cufflinks 0.017     Low Low
cufflinks 0.081        
cufflinks 0.721       High
cufflinks 0.263        
cufflinks 0.044     Low  
cufflinks 0.08     Low  
cufflinks 0.159     Low  
cufflinks 0.105     Low  
cufflinks 0.004     Low Low
cufflinks 0.184        
cufflinks 0.082        
cufflinks 0.028     Low  
cufflinks 0.092     Low  
cufflinks 0.059     Low  
cufflinks 0.169     Low  
cufflinks 0.214     Low  
cufflinks 0.003     Low Low
cufflinks 5.41936 0.898882 9.93984   High
cufflinks 3.26424 0.496732 6.03174    
cufflinks 2.55037 0.0 5.44907    
cufflinks 3.82951 0.642379 7.01664    
cufflinks 4.60397 0.802864 8.40508   High

0 Strain