Gene : PF20 C. reinhardtii v5.6
Primary Identifier:  ? Cre04.g227900 Defline:  (1 of 1) PTHR14604:SF3 - SPERM-ASSOCIATED ANTIGEN 16 PROTEIN
Genomic Order:  470 Name:  ? Cre04.g227900
Secondary Identifier:  ? PAC:30791439
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g227900 0.5kb upstream 0.5kb upstream 8797 true chromosome_4: 3484224-3493020 Chlamydomonas reinhardtii
Cre04.g227900 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 3484224-3484723 Chlamydomonas reinhardtii
Cre04.g227900 0.5kb downstream 0.5kb downstream 8797 true chromosome_4: 3484724-3493520 Chlamydomonas reinhardtii
Cre04.g227900 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 3493021-3493520 Chlamydomonas reinhardtii
Cre04.g227900 1.0kb upstream 1.0kb upstream 9297 true chromosome_4: 3483724-3493020 Chlamydomonas reinhardtii
Cre04.g227900 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 3483724-3484723 Chlamydomonas reinhardtii
Cre04.g227900 1.0kb downstream 1.0kb downstream 9297 true chromosome_4: 3484724-3494020 Chlamydomonas reinhardtii
Cre04.g227900 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 3493021-3494020 Chlamydomonas reinhardtii
Cre04.g227900 2.0kb upstream 2.0kb upstream 10297 true chromosome_4: 3482724-3493020 Chlamydomonas reinhardtii
Cre04.g227900 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 3482724-3484723 Chlamydomonas reinhardtii
Cre04.g227900 2.0kb downstream 2.0kb downstream 10297 true chromosome_4: 3484724-3495020 Chlamydomonas reinhardtii
Cre04.g227900 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 3493021-3495020 Chlamydomonas reinhardtii
Cre04.g227900 5.0kb upstream 5.0kb upstream 13297 true chromosome_4: 3479724-3493020 Chlamydomonas reinhardtii
Cre04.g227900 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 3479724-3484723 Chlamydomonas reinhardtii
Cre04.g227900 5.0kb downstream 5.0kb downstream 13297 true chromosome_4: 3484724-3498020 Chlamydomonas reinhardtii
Cre04.g227900 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 3493021-3498020 Chlamydomonas reinhardtii
Cre04.g227900 10.0kb upstream 10.0kb upstream 18297 true chromosome_4: 3474724-3493020 Chlamydomonas reinhardtii
Cre04.g227900 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 3474724-3484723 Chlamydomonas reinhardtii
Cre04.g227900 10.0kb downstream 10.0kb downstream 18297 true chromosome_4: 3484724-3503020 Chlamydomonas reinhardtii
Cre04.g227900 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 3493021-3503020 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108317 5260 Chlorophyte View MSA
123427230 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.664       Low
cufflinks 2.901        
cufflinks 4.23        
cufflinks 6.676       High
cufflinks 2.265        
cufflinks 2.171        
cufflinks 2.691        
cufflinks 3.645        
cufflinks 0.608       Low
cufflinks 0.553       Low
cufflinks 9.785       High
cufflinks 3.488        
cufflinks 1.201        
cufflinks 2.663        
cufflinks 4.873       High
cufflinks 0.949        
cufflinks 0.986        
cufflinks 2.867        
cufflinks 0.55       Low
cufflinks 3.259        
cufflinks 4.732       High
cufflinks 0.884        
cufflinks 2.37        
cufflinks 3.674        
cufflinks 0.656       Low
cufflinks 5.43821 0.895207 9.98121   High
cufflinks 10.8474 2.96254 18.7322    
cufflinks 11.8396 0.0 23.8121    
cufflinks 5.97607 0.945481 11.0067    
cufflinks 13.5228 2.44949 24.5961    

0 Strain