Gene : FAP30 C. reinhardtii v5.6
Primary Identifier:  ? Cre04.g223650 Defline:  (1 of 1) PF02494 - HYR domain (HYR)
Genomic Order:  371 Name:  ? Cre04.g223650
Secondary Identifier:  ? PAC:30791554
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g223650 0.5kb upstream 0.5kb upstream 9776 true chromosome_4: 2753740-2763515 Chlamydomonas reinhardtii
Cre04.g223650 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 2763016-2763515 Chlamydomonas reinhardtii
Cre04.g223650 0.5kb downstream 0.5kb downstream 9776 true chromosome_4: 2753240-2763015 Chlamydomonas reinhardtii
Cre04.g223650 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 2753240-2753739 Chlamydomonas reinhardtii
Cre04.g223650 1.0kb upstream 1.0kb upstream 10276 true chromosome_4: 2753740-2764015 Chlamydomonas reinhardtii
Cre04.g223650 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 2763016-2764015 Chlamydomonas reinhardtii
Cre04.g223650 1.0kb downstream 1.0kb downstream 10276 true chromosome_4: 2752740-2763015 Chlamydomonas reinhardtii
Cre04.g223650 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 2752740-2753739 Chlamydomonas reinhardtii
Cre04.g223650 2.0kb upstream 2.0kb upstream 11276 true chromosome_4: 2753740-2765015 Chlamydomonas reinhardtii
Cre04.g223650 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 2763016-2765015 Chlamydomonas reinhardtii
Cre04.g223650 2.0kb downstream 2.0kb downstream 11276 true chromosome_4: 2751740-2763015 Chlamydomonas reinhardtii
Cre04.g223650 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 2751740-2753739 Chlamydomonas reinhardtii
Cre04.g223650 5.0kb upstream 5.0kb upstream 14276 true chromosome_4: 2753740-2768015 Chlamydomonas reinhardtii
Cre04.g223650 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 2763016-2768015 Chlamydomonas reinhardtii
Cre04.g223650 5.0kb downstream 5.0kb downstream 14276 true chromosome_4: 2748740-2763015 Chlamydomonas reinhardtii
Cre04.g223650 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 2748740-2753739 Chlamydomonas reinhardtii
Cre04.g223650 10.0kb upstream 10.0kb upstream 19276 true chromosome_4: 2753740-2773015 Chlamydomonas reinhardtii
Cre04.g223650 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 2763016-2773015 Chlamydomonas reinhardtii
Cre04.g223650 10.0kb downstream 10.0kb downstream 19276 true chromosome_4: 2743740-2763015 Chlamydomonas reinhardtii
Cre04.g223650 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 2743740-2753739 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080942 5260 Chlorophyte Singleton cluster - no MSA
123398697 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.243       Low
cufflinks 0.806        
cufflinks 0.912        
cufflinks 0.789        
cufflinks 0.631        
cufflinks 0.686        
cufflinks 1.396       High
cufflinks 1.009        
cufflinks 0.533        
cufflinks 0.267       Low
cufflinks 1.369       High
cufflinks 1.289       High
cufflinks 0.512        
cufflinks 0.702        
cufflinks 0.789        
cufflinks 0.629        
cufflinks 0.644        
cufflinks 0.797        
cufflinks 0.521        
cufflinks 1.847       High
cufflinks 0.944        
cufflinks 0.598        
cufflinks 1.201        
cufflinks 1.408       High
cufflinks 0.613        
cufflinks 0.966156 0.067086 1.86523   Low
cufflinks 0.519595 0.0 1.21928   Low
cufflinks 1.50095 0.0 3.32162    
cufflinks 2.12234 0.337126 3.90756    
cufflinks 36.6708 2.36065 70.9809 High High

0 Strain