Gene : Cre03.g199600 C. reinhardtii v5.6
Defline:  (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) Genomic Order:  1450
Name:  ? Cre03.g199600 Secondary Identifier:  ? PAC:30786742
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g199600 0.5kb upstream 0.5kb upstream 6532 true chromosome_3: 8236404-8242935 Chlamydomonas reinhardtii
Cre03.g199600 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 8236404-8236903 Chlamydomonas reinhardtii
Cre03.g199600 0.5kb downstream 0.5kb downstream 6532 true chromosome_3: 8236904-8243435 Chlamydomonas reinhardtii
Cre03.g199600 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 8242936-8243435 Chlamydomonas reinhardtii
Cre03.g199600 1.0kb upstream 1.0kb upstream 7032 true chromosome_3: 8235904-8242935 Chlamydomonas reinhardtii
Cre03.g199600 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 8235904-8236903 Chlamydomonas reinhardtii
Cre03.g199600 1.0kb downstream 1.0kb downstream 7032 true chromosome_3: 8236904-8243935 Chlamydomonas reinhardtii
Cre03.g199600 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 8242936-8243935 Chlamydomonas reinhardtii
Cre03.g199600 2.0kb upstream 2.0kb upstream 8032 true chromosome_3: 8234904-8242935 Chlamydomonas reinhardtii
Cre03.g199600 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 8234904-8236903 Chlamydomonas reinhardtii
Cre03.g199600 2.0kb downstream 2.0kb downstream 8032 true chromosome_3: 8236904-8244935 Chlamydomonas reinhardtii
Cre03.g199600 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 8242936-8244935 Chlamydomonas reinhardtii
Cre03.g199600 5.0kb upstream 5.0kb upstream 11032 true chromosome_3: 8231904-8242935 Chlamydomonas reinhardtii
Cre03.g199600 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 8231904-8236903 Chlamydomonas reinhardtii
Cre03.g199600 5.0kb downstream 5.0kb downstream 11032 true chromosome_3: 8236904-8247935 Chlamydomonas reinhardtii
Cre03.g199600 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 8242936-8247935 Chlamydomonas reinhardtii
Cre03.g199600 10.0kb upstream 10.0kb upstream 16032 true chromosome_3: 8226904-8242935 Chlamydomonas reinhardtii
Cre03.g199600 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 8226904-8236903 Chlamydomonas reinhardtii
Cre03.g199600 10.0kb downstream 10.0kb downstream 16032 true chromosome_3: 8236904-8252935 Chlamydomonas reinhardtii
Cre03.g199600 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 8242936-8252935 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112765 5260 Chlorophyte View MSA
123427884 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.527       Low
cufflinks 0.731        
cufflinks 1.114       High
cufflinks 0.756        
cufflinks 0.676        
cufflinks 0.81        
cufflinks 0.639        
cufflinks 0.955        
cufflinks 0.613        
cufflinks 0.589        
cufflinks 0.813        
cufflinks 0.872        
cufflinks 0.924        
cufflinks 0.982        
cufflinks 0.457       Low
cufflinks 0.685        
cufflinks 0.888        
cufflinks 1.367       High
cufflinks 0.252       Low
cufflinks 1.329       High
cufflinks 0.592        
cufflinks 0.838        
cufflinks 0.979        
cufflinks 0.972        
cufflinks 0.66        
cufflinks 10.9432 1.82995 20.0564    
cufflinks 6.61038 0.950989 12.2698    
cufflinks 5.00829 0.0 11.0599    
cufflinks 4.57847 0.524374 8.63257   Low
cufflinks 5.2969 0.504945 10.0889    

0 Strain