Gene : DII2 C. reinhardtii v5.6
Primary Identifier:  ? Cre03.g186300 Defline:  (1 of 39) PTHR12298 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED
Genomic Order:  987 Name:  ? Cre03.g186300
Secondary Identifier:  ? PAC:30787174
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g186300 0.5kb upstream 0.5kb upstream 4091 true chromosome_3: 5543914-5548004 Chlamydomonas reinhardtii
Cre03.g186300 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 5543914-5544413 Chlamydomonas reinhardtii
Cre03.g186300 0.5kb downstream 0.5kb downstream 4091 true chromosome_3: 5544414-5548504 Chlamydomonas reinhardtii
Cre03.g186300 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 5548005-5548504 Chlamydomonas reinhardtii
Cre03.g186300 1.0kb upstream 1.0kb upstream 4591 true chromosome_3: 5543414-5548004 Chlamydomonas reinhardtii
Cre03.g186300 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 5543414-5544413 Chlamydomonas reinhardtii
Cre03.g186300 1.0kb downstream 1.0kb downstream 4591 true chromosome_3: 5544414-5549004 Chlamydomonas reinhardtii
Cre03.g186300 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 5548005-5549004 Chlamydomonas reinhardtii
Cre03.g186300 2.0kb upstream 2.0kb upstream 5591 true chromosome_3: 5542414-5548004 Chlamydomonas reinhardtii
Cre03.g186300 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 5542414-5544413 Chlamydomonas reinhardtii
Cre03.g186300 2.0kb downstream 2.0kb downstream 5591 true chromosome_3: 5544414-5550004 Chlamydomonas reinhardtii
Cre03.g186300 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 5548005-5550004 Chlamydomonas reinhardtii
Cre03.g186300 5.0kb upstream 5.0kb upstream 8591 true chromosome_3: 5539414-5548004 Chlamydomonas reinhardtii
Cre03.g186300 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 5539414-5544413 Chlamydomonas reinhardtii
Cre03.g186300 5.0kb downstream 5.0kb downstream 8591 true chromosome_3: 5544414-5553004 Chlamydomonas reinhardtii
Cre03.g186300 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 5548005-5553004 Chlamydomonas reinhardtii
Cre03.g186300 10.0kb upstream 10.0kb upstream 13591 true chromosome_3: 5534414-5548004 Chlamydomonas reinhardtii
Cre03.g186300 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 5534414-5544413 Chlamydomonas reinhardtii
Cre03.g186300 10.0kb downstream 10.0kb downstream 13591 true chromosome_3: 5544414-5558004 Chlamydomonas reinhardtii
Cre03.g186300 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 5548005-5558004 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110894 5260 Chlorophyte View MSA
123427242 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.607        
cufflinks 1.968       Low
cufflinks 13.513       High
cufflinks 17.708     High High
cufflinks 4.099        
cufflinks 5.055        
cufflinks 5.017        
cufflinks 9.512        
cufflinks 1.576       Low
cufflinks 2.569        
cufflinks 26.149     High High
cufflinks 6.001        
cufflinks 3.972        
cufflinks 5.087        
cufflinks 10.297        
cufflinks 2.012       Low
cufflinks 2.751        
cufflinks 7.568        
cufflinks 1.851       Low
cufflinks 5.655        
cufflinks 9.753        
cufflinks 2.502        
cufflinks 4.89        
cufflinks 10.596        
cufflinks 2.116       Low
cufflinks 4.32846 0.631537 8.02539    
cufflinks 4.32132 0.527811 8.11483   Low
cufflinks 13.3496 0.0 26.8495    
cufflinks 7.01359 1.18896 12.8382    
cufflinks 13.5224 2.70621 24.3385    

0 Strain