Gene : Cre04.g213500 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR23417//PTHR23417:SF18 - 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  198
Name:  ? Cre04.g213500 Secondary Identifier:  ? PAC:30791552
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g213500 0.5kb upstream 0.5kb upstream 4726 true chromosome_4: 1557855-1562580 Chlamydomonas reinhardtii
Cre04.g213500 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 1562081-1562580 Chlamydomonas reinhardtii
Cre04.g213500 0.5kb downstream 0.5kb downstream 4726 true chromosome_4: 1557355-1562080 Chlamydomonas reinhardtii
Cre04.g213500 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 1557355-1557854 Chlamydomonas reinhardtii
Cre04.g213500 1.0kb upstream 1.0kb upstream 5226 true chromosome_4: 1557855-1563080 Chlamydomonas reinhardtii
Cre04.g213500 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 1562081-1563080 Chlamydomonas reinhardtii
Cre04.g213500 1.0kb downstream 1.0kb downstream 5226 true chromosome_4: 1556855-1562080 Chlamydomonas reinhardtii
Cre04.g213500 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 1556855-1557854 Chlamydomonas reinhardtii
Cre04.g213500 2.0kb upstream 2.0kb upstream 6226 true chromosome_4: 1557855-1564080 Chlamydomonas reinhardtii
Cre04.g213500 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 1562081-1564080 Chlamydomonas reinhardtii
Cre04.g213500 2.0kb downstream 2.0kb downstream 6226 true chromosome_4: 1555855-1562080 Chlamydomonas reinhardtii
Cre04.g213500 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 1555855-1557854 Chlamydomonas reinhardtii
Cre04.g213500 5.0kb upstream 5.0kb upstream 9226 true chromosome_4: 1557855-1567080 Chlamydomonas reinhardtii
Cre04.g213500 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 1562081-1567080 Chlamydomonas reinhardtii
Cre04.g213500 5.0kb downstream 5.0kb downstream 9226 true chromosome_4: 1552855-1562080 Chlamydomonas reinhardtii
Cre04.g213500 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 1552855-1557854 Chlamydomonas reinhardtii
Cre04.g213500 10.0kb upstream 10.0kb upstream 14226 true chromosome_4: 1557855-1572080 Chlamydomonas reinhardtii
Cre04.g213500 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 1562081-1572080 Chlamydomonas reinhardtii
Cre04.g213500 10.0kb downstream 10.0kb downstream 14226 true chromosome_4: 1547855-1562080 Chlamydomonas reinhardtii
Cre04.g213500 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 1547855-1557854 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094100 5260 Chlorophyte View MSA
123425871 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.44        
cufflinks 2.166       High
cufflinks 0.663       Low
cufflinks 1.163        
cufflinks 1.69        
cufflinks 1.498        
cufflinks 1.024        
cufflinks 1.538        
cufflinks 1.652        
cufflinks 0.889        
cufflinks 1.178        
cufflinks 1.46        
cufflinks 0.769       Low
cufflinks 1.684        
cufflinks 1.396        
cufflinks 2.398       High
cufflinks 0.809        
cufflinks 1.492        
cufflinks 0.31       Low
cufflinks 1.278        
cufflinks 1.451        
cufflinks 0.976        
cufflinks 1.825        
cufflinks 1.589        
cufflinks 0.775       Low
cufflinks 6.52544 1.10538 11.9455   Low
cufflinks 11.9461 3.07924 20.813    
cufflinks 2.22713 0.0 5.22007    
cufflinks 4.27032 0.601587 7.93905   Low
cufflinks 6.05107 1.03545 11.0667    

0 Strain