Gene : CPC1 C. reinhardtii v5.6
Primary Identifier:  ? Cre03.g183200 Defline:  (1 of 1) PTHR14919:SF0 - SPERM FLAGELLAR PROTEIN 2
Genomic Order:  925 Name:  ? Cre03.g183200
Secondary Identifier:  ? PAC:30787554
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g183200 0.5kb upstream 0.5kb upstream 7943 true chromosome_3: 5251349-5259291 Chlamydomonas reinhardtii
Cre03.g183200 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 5251349-5251848 Chlamydomonas reinhardtii
Cre03.g183200 0.5kb downstream 0.5kb downstream 7943 true chromosome_3: 5251849-5259791 Chlamydomonas reinhardtii
Cre03.g183200 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 5259292-5259791 Chlamydomonas reinhardtii
Cre03.g183200 1.0kb upstream 1.0kb upstream 8443 true chromosome_3: 5250849-5259291 Chlamydomonas reinhardtii
Cre03.g183200 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 5250849-5251848 Chlamydomonas reinhardtii
Cre03.g183200 1.0kb downstream 1.0kb downstream 8443 true chromosome_3: 5251849-5260291 Chlamydomonas reinhardtii
Cre03.g183200 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 5259292-5260291 Chlamydomonas reinhardtii
Cre03.g183200 2.0kb upstream 2.0kb upstream 9443 true chromosome_3: 5249849-5259291 Chlamydomonas reinhardtii
Cre03.g183200 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 5249849-5251848 Chlamydomonas reinhardtii
Cre03.g183200 2.0kb downstream 2.0kb downstream 9443 true chromosome_3: 5251849-5261291 Chlamydomonas reinhardtii
Cre03.g183200 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 5259292-5261291 Chlamydomonas reinhardtii
Cre03.g183200 5.0kb upstream 5.0kb upstream 12443 true chromosome_3: 5246849-5259291 Chlamydomonas reinhardtii
Cre03.g183200 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 5246849-5251848 Chlamydomonas reinhardtii
Cre03.g183200 5.0kb downstream 5.0kb downstream 12443 true chromosome_3: 5251849-5264291 Chlamydomonas reinhardtii
Cre03.g183200 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 5259292-5264291 Chlamydomonas reinhardtii
Cre03.g183200 10.0kb upstream 10.0kb upstream 17443 true chromosome_3: 5241849-5259291 Chlamydomonas reinhardtii
Cre03.g183200 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 5241849-5251848 Chlamydomonas reinhardtii
Cre03.g183200 10.0kb downstream 10.0kb downstream 17443 true chromosome_3: 5251849-5269291 Chlamydomonas reinhardtii
Cre03.g183200 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 5259292-5269291 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110444 5260 Chlorophyte View MSA
123423086 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.546       Low
cufflinks 2.65        
cufflinks 4.684       High
cufflinks 6.202       High
cufflinks 1.702        
cufflinks 1.355        
cufflinks 2.014        
cufflinks 3.202        
cufflinks 0.538       Low
cufflinks 0.913        
cufflinks 10.458       High
cufflinks 2.568        
cufflinks 0.859        
cufflinks 1.875        
cufflinks 3.732        
cufflinks 0.578       Low
cufflinks 1.14        
cufflinks 2.557        
cufflinks 0.558       Low
cufflinks 2.902        
cufflinks 3.907        
cufflinks 0.776        
cufflinks 1.827        
cufflinks 3.088        
cufflinks 0.604       Low
cufflinks 3.1893 0.482705 5.89589    
cufflinks 6.74775 1.84146 11.654    
cufflinks 9.61115 0.0 19.3852    
cufflinks 7.34881 0.564397 14.1332    
cufflinks 9.19992 1.58046 16.8194    

0 Strain