Gene : RRM16 C. reinhardtii v5.6
Primary Identifier:  ? Cre03.g175800 Defline:  (1 of 1) 2.1.1.193 - 16S rRNA (uracil(1498)-N(3))-methyltransferase / M(3)U(1498) specific methyltransferase
Genomic Order:  763 Name:  ? Cre03.g175800
Secondary Identifier:  ? PAC:30787276
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g175800 0.5kb upstream 0.5kb upstream 3156 true chromosome_3: 4449754-4452909 Chlamydomonas reinhardtii
Cre03.g175800 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 4452410-4452909 Chlamydomonas reinhardtii
Cre03.g175800 0.5kb downstream 0.5kb downstream 3156 true chromosome_3: 4449254-4452409 Chlamydomonas reinhardtii
Cre03.g175800 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 4449254-4449753 Chlamydomonas reinhardtii
Cre03.g175800 1.0kb upstream 1.0kb upstream 3656 true chromosome_3: 4449754-4453409 Chlamydomonas reinhardtii
Cre03.g175800 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 4452410-4453409 Chlamydomonas reinhardtii
Cre03.g175800 1.0kb downstream 1.0kb downstream 3656 true chromosome_3: 4448754-4452409 Chlamydomonas reinhardtii
Cre03.g175800 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 4448754-4449753 Chlamydomonas reinhardtii
Cre03.g175800 2.0kb upstream 2.0kb upstream 4656 true chromosome_3: 4449754-4454409 Chlamydomonas reinhardtii
Cre03.g175800 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 4452410-4454409 Chlamydomonas reinhardtii
Cre03.g175800 2.0kb downstream 2.0kb downstream 4656 true chromosome_3: 4447754-4452409 Chlamydomonas reinhardtii
Cre03.g175800 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 4447754-4449753 Chlamydomonas reinhardtii
Cre03.g175800 5.0kb upstream 5.0kb upstream 7656 true chromosome_3: 4449754-4457409 Chlamydomonas reinhardtii
Cre03.g175800 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 4452410-4457409 Chlamydomonas reinhardtii
Cre03.g175800 5.0kb downstream 5.0kb downstream 7656 true chromosome_3: 4444754-4452409 Chlamydomonas reinhardtii
Cre03.g175800 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 4444754-4449753 Chlamydomonas reinhardtii
Cre03.g175800 10.0kb upstream 10.0kb upstream 12656 true chromosome_3: 4449754-4462409 Chlamydomonas reinhardtii
Cre03.g175800 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 4452410-4462409 Chlamydomonas reinhardtii
Cre03.g175800 10.0kb downstream 10.0kb downstream 12656 true chromosome_3: 4439754-4452409 Chlamydomonas reinhardtii
Cre03.g175800 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 4439754-4449753 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124086102 5260 Chlorophyte View MSA
123427980 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.843        
cufflinks 2.658        
cufflinks 2.158        
cufflinks 2.518        
cufflinks 2.455        
cufflinks 2.194        
cufflinks 2.307        
cufflinks 2.406        
cufflinks 2.267        
cufflinks 1.086       Low
cufflinks 2.444        
cufflinks 2.217        
cufflinks 1.56        
cufflinks 2.672        
cufflinks 1.744        
cufflinks 2.606        
cufflinks 1.283       Low
cufflinks 2.356        
cufflinks 0.65       Low
cufflinks 2.036        
cufflinks 1.6        
cufflinks 1.521        
cufflinks 1.92        
cufflinks 2.326        
cufflinks 0.931       Low
cufflinks 2.8391 0.243299 5.43489    
cufflinks 8.2052 1.84085 14.5695   High
cufflinks 1.09296 0.0 2.85474    
cufflinks 2.50946 0.176989 4.84193    
cufflinks 7.03612 1.20401 12.8682    

0 Strain