Gene : FAP56 C. reinhardtii v5.6
Primary Identifier:  ? Cre03.g171900 Defline:  Flagellar Associated Protein 56
Genomic Order:  678 Name:  ? Cre03.g171900
Secondary Identifier:  ? PAC:30787882
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g171900 0.5kb upstream 0.5kb upstream 4693 true chromosome_3: 3986335-3991027 Chlamydomonas reinhardtii
Cre03.g171900 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 3986335-3986834 Chlamydomonas reinhardtii
Cre03.g171900 0.5kb downstream 0.5kb downstream 4693 true chromosome_3: 3986835-3991527 Chlamydomonas reinhardtii
Cre03.g171900 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 3991028-3991527 Chlamydomonas reinhardtii
Cre03.g171900 1.0kb upstream 1.0kb upstream 5193 true chromosome_3: 3985835-3991027 Chlamydomonas reinhardtii
Cre03.g171900 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 3985835-3986834 Chlamydomonas reinhardtii
Cre03.g171900 1.0kb downstream 1.0kb downstream 5193 true chromosome_3: 3986835-3992027 Chlamydomonas reinhardtii
Cre03.g171900 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 3991028-3992027 Chlamydomonas reinhardtii
Cre03.g171900 2.0kb upstream 2.0kb upstream 6193 true chromosome_3: 3984835-3991027 Chlamydomonas reinhardtii
Cre03.g171900 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 3984835-3986834 Chlamydomonas reinhardtii
Cre03.g171900 2.0kb downstream 2.0kb downstream 6193 true chromosome_3: 3986835-3993027 Chlamydomonas reinhardtii
Cre03.g171900 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 3991028-3993027 Chlamydomonas reinhardtii
Cre03.g171900 5.0kb upstream 5.0kb upstream 9193 true chromosome_3: 3981835-3991027 Chlamydomonas reinhardtii
Cre03.g171900 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 3981835-3986834 Chlamydomonas reinhardtii
Cre03.g171900 5.0kb downstream 5.0kb downstream 9193 true chromosome_3: 3986835-3996027 Chlamydomonas reinhardtii
Cre03.g171900 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 3991028-3996027 Chlamydomonas reinhardtii
Cre03.g171900 10.0kb upstream 10.0kb upstream 14193 true chromosome_3: 3976835-3991027 Chlamydomonas reinhardtii
Cre03.g171900 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 3976835-3986834 Chlamydomonas reinhardtii
Cre03.g171900 10.0kb downstream 10.0kb downstream 14193 true chromosome_3: 3986835-4001027 Chlamydomonas reinhardtii
Cre03.g171900 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 3991028-4001027 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111006 5260 Chlorophyte View MSA
123423196 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.212       Low
cufflinks 7.338        
cufflinks 10.657        
cufflinks 35.302     High High
cufflinks 53.776     High High
cufflinks 7.247        
cufflinks 7.758        
cufflinks 7.448        
cufflinks 18.787     High  
cufflinks 8.247        
cufflinks 115.833     High High
cufflinks 19.725     High  
cufflinks 7.087        
cufflinks 7.476        
cufflinks 48.353     High High
cufflinks 4.528       Low
cufflinks 10.475        
cufflinks 17.39     High  
cufflinks 3.809       Low
cufflinks 7.773        
cufflinks 41.449     High High
cufflinks 15.085     High  
cufflinks 9.572        
cufflinks 33.046     High High
cufflinks 10.949        
cufflinks 3.399 0.571311 6.22668    
cufflinks 20.2523 5.20918 35.2953    
cufflinks 16.755 0.0 33.9032    
cufflinks 9.25661 0.97783 17.5354    
cufflinks 6.021 1.20453 10.8375   Low

0 Strain