Gene : FAP1 C. reinhardtii v5.6
Primary Identifier:  ? Cre02.g144450 Defline:  Flagellar Associated Protein 1
Genomic Order:  1254 Name:  ? Cre02.g144450
Secondary Identifier:  ? PAC:30786091
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g144450 0.5kb upstream 0.5kb upstream 3302 true chromosome_2: 7438239-7441540 Chlamydomonas reinhardtii
Cre02.g144450 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 7441041-7441540 Chlamydomonas reinhardtii
Cre02.g144450 0.5kb downstream 0.5kb downstream 3302 true chromosome_2: 7437739-7441040 Chlamydomonas reinhardtii
Cre02.g144450 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 7437739-7438238 Chlamydomonas reinhardtii
Cre02.g144450 1.0kb upstream 1.0kb upstream 3802 true chromosome_2: 7438239-7442040 Chlamydomonas reinhardtii
Cre02.g144450 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 7441041-7442040 Chlamydomonas reinhardtii
Cre02.g144450 1.0kb downstream 1.0kb downstream 3802 true chromosome_2: 7437239-7441040 Chlamydomonas reinhardtii
Cre02.g144450 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 7437239-7438238 Chlamydomonas reinhardtii
Cre02.g144450 2.0kb upstream 2.0kb upstream 4802 true chromosome_2: 7438239-7443040 Chlamydomonas reinhardtii
Cre02.g144450 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 7441041-7443040 Chlamydomonas reinhardtii
Cre02.g144450 2.0kb downstream 2.0kb downstream 4802 true chromosome_2: 7436239-7441040 Chlamydomonas reinhardtii
Cre02.g144450 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 7436239-7438238 Chlamydomonas reinhardtii
Cre02.g144450 5.0kb upstream 5.0kb upstream 7802 true chromosome_2: 7438239-7446040 Chlamydomonas reinhardtii
Cre02.g144450 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 7441041-7446040 Chlamydomonas reinhardtii
Cre02.g144450 5.0kb downstream 5.0kb downstream 7802 true chromosome_2: 7433239-7441040 Chlamydomonas reinhardtii
Cre02.g144450 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 7433239-7438238 Chlamydomonas reinhardtii
Cre02.g144450 10.0kb upstream 10.0kb upstream 12802 true chromosome_2: 7438239-7451040 Chlamydomonas reinhardtii
Cre02.g144450 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 7441041-7451040 Chlamydomonas reinhardtii
Cre02.g144450 10.0kb downstream 10.0kb downstream 12802 true chromosome_2: 7428239-7441040 Chlamydomonas reinhardtii
Cre02.g144450 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 7428239-7438238 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124093385 5260 Chlorophyte View MSA
123410546 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.874       Low
cufflinks 15.504     High  
cufflinks 21.127     High High
cufflinks 30.199     High High
cufflinks 9.921        
cufflinks 12.236        
cufflinks 6.619        
cufflinks 12.376        
cufflinks 4.101        
cufflinks 5.289        
cufflinks 51.262     High High
cufflinks 10.938        
cufflinks 7.681        
cufflinks 12.254        
cufflinks 28.329     High High
cufflinks 3.499       Low
cufflinks 3.968       Low
cufflinks 12.838        
cufflinks 3.519       Low
cufflinks 4.427        
cufflinks 22.047     High High
cufflinks 4.642        
cufflinks 8.007        
cufflinks 15.205        
cufflinks 2.744       Low
cufflinks 14.64 2.03231 27.2478   Low
cufflinks 19.0369 5.19517 32.8786    
cufflinks 23.8264 0.0 47.9329    
cufflinks 11.5737 1.8044 21.3429    
cufflinks 25.5513 4.55846 46.5441    

0 Strain