Gene : FAP96 C. reinhardtii v5.6
Primary Identifier:  ? Cre03.g146127 Defline:  (1 of 1) PTHR31144:SF1 - UPF0602 PROTEIN C4ORF47
Genomic Order:  122 Name:  ? Cre03.g146127
Secondary Identifier:  ? PAC:30787019
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g146127 0.5kb upstream 0.5kb upstream 3584 true chromosome_3: 732454-736037 Chlamydomonas reinhardtii
Cre03.g146127 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 732454-732953 Chlamydomonas reinhardtii
Cre03.g146127 0.5kb downstream 0.5kb downstream 3584 true chromosome_3: 732954-736537 Chlamydomonas reinhardtii
Cre03.g146127 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 736038-736537 Chlamydomonas reinhardtii
Cre03.g146127 1.0kb upstream 1.0kb upstream 4084 true chromosome_3: 731954-736037 Chlamydomonas reinhardtii
Cre03.g146127 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 731954-732953 Chlamydomonas reinhardtii
Cre03.g146127 1.0kb downstream 1.0kb downstream 4084 true chromosome_3: 732954-737037 Chlamydomonas reinhardtii
Cre03.g146127 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 736038-737037 Chlamydomonas reinhardtii
Cre03.g146127 2.0kb upstream 2.0kb upstream 5084 true chromosome_3: 730954-736037 Chlamydomonas reinhardtii
Cre03.g146127 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 730954-732953 Chlamydomonas reinhardtii
Cre03.g146127 2.0kb downstream 2.0kb downstream 5084 true chromosome_3: 732954-738037 Chlamydomonas reinhardtii
Cre03.g146127 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 736038-738037 Chlamydomonas reinhardtii
Cre03.g146127 5.0kb upstream 5.0kb upstream 8084 true chromosome_3: 727954-736037 Chlamydomonas reinhardtii
Cre03.g146127 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 727954-732953 Chlamydomonas reinhardtii
Cre03.g146127 5.0kb downstream 5.0kb downstream 8084 true chromosome_3: 732954-741037 Chlamydomonas reinhardtii
Cre03.g146127 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 736038-741037 Chlamydomonas reinhardtii
Cre03.g146127 10.0kb upstream 10.0kb upstream 13084 true chromosome_3: 722954-736037 Chlamydomonas reinhardtii
Cre03.g146127 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 722954-732953 Chlamydomonas reinhardtii
Cre03.g146127 10.0kb downstream 10.0kb downstream 13084 true chromosome_3: 732954-746037 Chlamydomonas reinhardtii
Cre03.g146127 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 736038-746037 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110167 5260 Chlorophyte View MSA
123423052 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.964        
cufflinks 6.914        
cufflinks 16.227     High High
cufflinks 30.27     High High
cufflinks 5.196        
cufflinks 5.528        
cufflinks 5.763        
cufflinks 11.573        
cufflinks 2.362       Low
cufflinks 1.91       Low
cufflinks 51.293     High High
cufflinks 9.186        
cufflinks 2.46       Low
cufflinks 5.507        
cufflinks 16.934     High High
cufflinks 2.311       Low
cufflinks 3.733        
cufflinks 9.148        
cufflinks 2.011       Low
cufflinks 10.132        
cufflinks 15.338     High  
cufflinks 3.024        
cufflinks 6.425        
cufflinks 15.478     High  
cufflinks 2.32       Low
cufflinks 2.92892 0.356433 5.50141    
cufflinks 11.975 3.25918 20.6908    
cufflinks 10.2218 0.0 20.5723    
cufflinks 7.19552 1.17071 13.2203    
cufflinks 12.4176 2.41368 22.4216   Low

0 Strain