Gene : FAP226 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g728300 Defline:  (1 of 2) 3.4.22.54 - Calpain-3 / Muscle-specific calcium-activated neutral protease 3
Genomic Order:  708 Name:  ? Cre17.g728300
Secondary Identifier:  ? PAC:30782854
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g728300 0.5kb upstream 0.5kb upstream 10566 true chromosome_17: 3892219-3902784 Chlamydomonas reinhardtii
Cre17.g728300 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 3902285-3902784 Chlamydomonas reinhardtii
Cre17.g728300 0.5kb downstream 0.5kb downstream 10566 true chromosome_17: 3891719-3902284 Chlamydomonas reinhardtii
Cre17.g728300 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 3891719-3892218 Chlamydomonas reinhardtii
Cre17.g728300 1.0kb upstream 1.0kb upstream 11066 true chromosome_17: 3892219-3903284 Chlamydomonas reinhardtii
Cre17.g728300 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 3902285-3903284 Chlamydomonas reinhardtii
Cre17.g728300 1.0kb downstream 1.0kb downstream 11066 true chromosome_17: 3891219-3902284 Chlamydomonas reinhardtii
Cre17.g728300 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 3891219-3892218 Chlamydomonas reinhardtii
Cre17.g728300 2.0kb upstream 2.0kb upstream 12066 true chromosome_17: 3892219-3904284 Chlamydomonas reinhardtii
Cre17.g728300 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 3902285-3904284 Chlamydomonas reinhardtii
Cre17.g728300 2.0kb downstream 2.0kb downstream 12066 true chromosome_17: 3890219-3902284 Chlamydomonas reinhardtii
Cre17.g728300 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 3890219-3892218 Chlamydomonas reinhardtii
Cre17.g728300 5.0kb upstream 5.0kb upstream 15066 true chromosome_17: 3892219-3907284 Chlamydomonas reinhardtii
Cre17.g728300 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 3902285-3907284 Chlamydomonas reinhardtii
Cre17.g728300 5.0kb downstream 5.0kb downstream 15066 true chromosome_17: 3887219-3902284 Chlamydomonas reinhardtii
Cre17.g728300 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 3887219-3892218 Chlamydomonas reinhardtii
Cre17.g728300 10.0kb upstream 10.0kb upstream 20066 true chromosome_17: 3892219-3912284 Chlamydomonas reinhardtii
Cre17.g728300 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 3902285-3912284 Chlamydomonas reinhardtii
Cre17.g728300 10.0kb downstream 10.0kb downstream 20066 true chromosome_17: 3882219-3902284 Chlamydomonas reinhardtii
Cre17.g728300 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 3882219-3892218 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081707 5260 Chlorophyte View MSA
123399421 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.194       Low
cufflinks 1.059        
cufflinks 1.241        
cufflinks 2.262       High
cufflinks 0.568        
cufflinks 0.818        
cufflinks 1.28        
cufflinks 1.674        
cufflinks 0.08     Low Low
cufflinks 0.401        
cufflinks 1.925       High
cufflinks 1.667        
cufflinks 0.591        
cufflinks 0.925        
cufflinks 1.709        
cufflinks 0.304       Low
cufflinks 0.392        
cufflinks 1.092        
cufflinks 0.333        
cufflinks 1.833        
cufflinks 1.456        
cufflinks 0.311       Low
cufflinks 2.31       High
cufflinks 1.413        
cufflinks 0.261       Low
cufflinks 1.23588 0.100316 2.37145   High
cufflinks 2.36666 0.289066 4.44425    
cufflinks 1.73769 0.0 3.81408    
cufflinks 2.33375 0.359327 4.30817   High
cufflinks 3.9398 0.741658 7.13794    

0 Strain