Gene : FAP13 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g723450 Defline:  (1 of 2) PF05729 - NACHT domain (NACHT)
Genomic Order:  605 Name:  ? Cre17.g723450
Secondary Identifier:  ? PAC:30782721
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g723450 0.5kb upstream 0.5kb upstream 9700 true chromosome_17: 3336642-3346341 Chlamydomonas reinhardtii
Cre17.g723450 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 3336642-3337141 Chlamydomonas reinhardtii
Cre17.g723450 0.5kb downstream 0.5kb downstream 9700 true chromosome_17: 3337142-3346841 Chlamydomonas reinhardtii
Cre17.g723450 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 3346342-3346841 Chlamydomonas reinhardtii
Cre17.g723450 1.0kb upstream 1.0kb upstream 10200 true chromosome_17: 3336142-3346341 Chlamydomonas reinhardtii
Cre17.g723450 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 3336142-3337141 Chlamydomonas reinhardtii
Cre17.g723450 1.0kb downstream 1.0kb downstream 10200 true chromosome_17: 3337142-3347341 Chlamydomonas reinhardtii
Cre17.g723450 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 3346342-3347341 Chlamydomonas reinhardtii
Cre17.g723450 2.0kb upstream 2.0kb upstream 11200 true chromosome_17: 3335142-3346341 Chlamydomonas reinhardtii
Cre17.g723450 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 3335142-3337141 Chlamydomonas reinhardtii
Cre17.g723450 2.0kb downstream 2.0kb downstream 11200 true chromosome_17: 3337142-3348341 Chlamydomonas reinhardtii
Cre17.g723450 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 3346342-3348341 Chlamydomonas reinhardtii
Cre17.g723450 5.0kb upstream 5.0kb upstream 14200 true chromosome_17: 3332142-3346341 Chlamydomonas reinhardtii
Cre17.g723450 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 3332142-3337141 Chlamydomonas reinhardtii
Cre17.g723450 5.0kb downstream 5.0kb downstream 14200 true chromosome_17: 3337142-3351341 Chlamydomonas reinhardtii
Cre17.g723450 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 3346342-3351341 Chlamydomonas reinhardtii
Cre17.g723450 10.0kb upstream 10.0kb upstream 19200 true chromosome_17: 3327142-3346341 Chlamydomonas reinhardtii
Cre17.g723450 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 3327142-3337141 Chlamydomonas reinhardtii
Cre17.g723450 10.0kb downstream 10.0kb downstream 19200 true chromosome_17: 3337142-3356341 Chlamydomonas reinhardtii
Cre17.g723450 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 3346342-3356341 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124076142 5260 Chlorophyte View MSA
123394261 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.062     Low Low
cufflinks 0.46        
cufflinks 0.547        
cufflinks 0.944       High
cufflinks 0.315        
cufflinks 0.318        
cufflinks 0.45        
cufflinks 0.797        
cufflinks 0.104       Low
cufflinks 0.129       Low
cufflinks 0.962       High
cufflinks 0.829        
cufflinks 0.114     Low Low
cufflinks 0.416        
cufflinks 0.429        
cufflinks 0.17        
cufflinks 0.493        
cufflinks 0.542        
cufflinks 0.179        
cufflinks 2.874       High
cufflinks 0.797        
cufflinks 0.186        
cufflinks 0.45        
cufflinks 0.519        
cufflinks 0.261        
cufflinks 0.278054 0.0 0.584231   High
cufflinks 2.85846 0.667374 5.04954    
cufflinks 2.26043 0.0 4.7922    
cufflinks 2.75667 0.0 5.61062   High
cufflinks 3.84425 0.771656 6.91684   Low

0 Strain