Gene : IFT81 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g723600 Defline:  (1 of 1) PTHR15614:SF2 - INTRAFLAGELLAR TRANSPORT PROTEIN 81 HOMOLOG
Genomic Order:  608 Name:  ? Cre17.g723600
Secondary Identifier:  ? PAC:30781829
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g723600 0.5kb upstream 0.5kb upstream 6174 true chromosome_17: 3362408-3368581 Chlamydomonas reinhardtii
Cre17.g723600 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 3368082-3368581 Chlamydomonas reinhardtii
Cre17.g723600 0.5kb downstream 0.5kb downstream 6174 true chromosome_17: 3361908-3368081 Chlamydomonas reinhardtii
Cre17.g723600 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 3361908-3362407 Chlamydomonas reinhardtii
Cre17.g723600 1.0kb upstream 1.0kb upstream 6674 true chromosome_17: 3362408-3369081 Chlamydomonas reinhardtii
Cre17.g723600 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 3368082-3369081 Chlamydomonas reinhardtii
Cre17.g723600 1.0kb downstream 1.0kb downstream 6674 true chromosome_17: 3361408-3368081 Chlamydomonas reinhardtii
Cre17.g723600 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 3361408-3362407 Chlamydomonas reinhardtii
Cre17.g723600 2.0kb upstream 2.0kb upstream 7674 true chromosome_17: 3362408-3370081 Chlamydomonas reinhardtii
Cre17.g723600 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 3368082-3370081 Chlamydomonas reinhardtii
Cre17.g723600 2.0kb downstream 2.0kb downstream 7674 true chromosome_17: 3360408-3368081 Chlamydomonas reinhardtii
Cre17.g723600 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 3360408-3362407 Chlamydomonas reinhardtii
Cre17.g723600 5.0kb upstream 5.0kb upstream 10674 true chromosome_17: 3362408-3373081 Chlamydomonas reinhardtii
Cre17.g723600 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 3368082-3373081 Chlamydomonas reinhardtii
Cre17.g723600 5.0kb downstream 5.0kb downstream 10674 true chromosome_17: 3357408-3368081 Chlamydomonas reinhardtii
Cre17.g723600 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 3357408-3362407 Chlamydomonas reinhardtii
Cre17.g723600 10.0kb upstream 10.0kb upstream 15674 true chromosome_17: 3362408-3378081 Chlamydomonas reinhardtii
Cre17.g723600 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 3368082-3378081 Chlamydomonas reinhardtii
Cre17.g723600 10.0kb downstream 10.0kb downstream 15674 true chromosome_17: 3352408-3368081 Chlamydomonas reinhardtii
Cre17.g723600 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 3352408-3362407 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109954 5260 Chlorophyte View MSA
123423020 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.459       Low
cufflinks 11.583        
cufflinks 19.039     High High
cufflinks 28.398     High High
cufflinks 7.992        
cufflinks 8.133        
cufflinks 9.168        
cufflinks 13.482        
cufflinks 2.443       Low
cufflinks 4.184        
cufflinks 35.714     High High
cufflinks 12.15        
cufflinks 4.271        
cufflinks 9.689        
cufflinks 16.551     High  
cufflinks 3.102       Low
cufflinks 4.588        
cufflinks 12.026        
cufflinks 3.36       Low
cufflinks 12.095        
cufflinks 16.685     High  
cufflinks 3.653       Low
cufflinks 8.26        
cufflinks 12.542        
cufflinks 2.871       Low
cufflinks 2.68109 0.455113 4.90706   Low
cufflinks 11.5076 3.11532 19.8999    
cufflinks 9.58859 0.0 19.3175    
cufflinks 9.46833 0.709392 18.2273   High
cufflinks 14.2434 2.1754 26.3114    

0 Strain