Gene : FAP338 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g719600 Defline:  Flagellar Associated Protein 338
Genomic Order:  520 Name:  ? Cre17.g719600
Secondary Identifier:  ? PAC:30782544
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g719600 0.5kb upstream 0.5kb upstream 2886 true chromosome_17: 2892702-2895587 Chlamydomonas reinhardtii
Cre17.g719600 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 2892702-2893201 Chlamydomonas reinhardtii
Cre17.g719600 0.5kb downstream 0.5kb downstream 2886 true chromosome_17: 2893202-2896087 Chlamydomonas reinhardtii
Cre17.g719600 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 2895588-2896087 Chlamydomonas reinhardtii
Cre17.g719600 1.0kb upstream 1.0kb upstream 3386 true chromosome_17: 2892202-2895587 Chlamydomonas reinhardtii
Cre17.g719600 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 2892202-2893201 Chlamydomonas reinhardtii
Cre17.g719600 1.0kb downstream 1.0kb downstream 3386 true chromosome_17: 2893202-2896587 Chlamydomonas reinhardtii
Cre17.g719600 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 2895588-2896587 Chlamydomonas reinhardtii
Cre17.g719600 2.0kb upstream 2.0kb upstream 4386 true chromosome_17: 2891202-2895587 Chlamydomonas reinhardtii
Cre17.g719600 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 2891202-2893201 Chlamydomonas reinhardtii
Cre17.g719600 2.0kb downstream 2.0kb downstream 4386 true chromosome_17: 2893202-2897587 Chlamydomonas reinhardtii
Cre17.g719600 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 2895588-2897587 Chlamydomonas reinhardtii
Cre17.g719600 5.0kb upstream 5.0kb upstream 7386 true chromosome_17: 2888202-2895587 Chlamydomonas reinhardtii
Cre17.g719600 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 2888202-2893201 Chlamydomonas reinhardtii
Cre17.g719600 5.0kb downstream 5.0kb downstream 7386 true chromosome_17: 2893202-2900587 Chlamydomonas reinhardtii
Cre17.g719600 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 2895588-2900587 Chlamydomonas reinhardtii
Cre17.g719600 10.0kb upstream 10.0kb upstream 12386 true chromosome_17: 2883202-2895587 Chlamydomonas reinhardtii
Cre17.g719600 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 2883202-2893201 Chlamydomonas reinhardtii
Cre17.g719600 10.0kb downstream 10.0kb downstream 12386 true chromosome_17: 2893202-2905587 Chlamydomonas reinhardtii
Cre17.g719600 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 2895588-2905587 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124078800 5260 Chlorophyte Singleton cluster - no MSA
123396702 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.338       Low
cufflinks 1.29        
cufflinks 1.535       High
cufflinks 0.372        
cufflinks 1.559       High
cufflinks 2.287       High
cufflinks 0.863        
cufflinks 1.317        
cufflinks 0.48        
cufflinks 0.329       Low
cufflinks 0.222       Low
cufflinks 1.653       High
cufflinks 1.454        
cufflinks 1.811       High
cufflinks 0.304       Low
cufflinks 0.914        
cufflinks 0.617        
cufflinks 1.079        
cufflinks 0.153       Low
cufflinks 0.591        
cufflinks 0.756        
cufflinks 0.475        
cufflinks 0.969        
cufflinks 0.924        
cufflinks 0.869        
cufflinks 2.13046 0.0974944 4.16342   Low
cufflinks 1.17318 0.0 2.61092   Low
cufflinks 23.596 0.0 47.6178   High
cufflinks 2.5986 0.207725 4.98947    
cufflinks 12.5498 2.52178 22.5778    

0 Strain