Gene : BBS1 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g741950 Defline:  (1 of 1) K16746 - Bardet-Biedl syndrome 1 protein (BBS1)
Genomic Order:  1033 Name:  ? Cre17.g741950
Secondary Identifier:  ? PAC:30781890
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g741950 0.5kb upstream 0.5kb upstream 7142 true chromosome_17: 6202065-6209206 Chlamydomonas reinhardtii
Cre17.g741950 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 6202065-6202564 Chlamydomonas reinhardtii
Cre17.g741950 0.5kb downstream 0.5kb downstream 7142 true chromosome_17: 6202565-6209706 Chlamydomonas reinhardtii
Cre17.g741950 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 6209207-6209706 Chlamydomonas reinhardtii
Cre17.g741950 1.0kb upstream 1.0kb upstream 7642 true chromosome_17: 6201565-6209206 Chlamydomonas reinhardtii
Cre17.g741950 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 6201565-6202564 Chlamydomonas reinhardtii
Cre17.g741950 1.0kb downstream 1.0kb downstream 7642 true chromosome_17: 6202565-6210206 Chlamydomonas reinhardtii
Cre17.g741950 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 6209207-6210206 Chlamydomonas reinhardtii
Cre17.g741950 2.0kb upstream 2.0kb upstream 8642 true chromosome_17: 6200565-6209206 Chlamydomonas reinhardtii
Cre17.g741950 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 6200565-6202564 Chlamydomonas reinhardtii
Cre17.g741950 2.0kb downstream 2.0kb downstream 8642 true chromosome_17: 6202565-6211206 Chlamydomonas reinhardtii
Cre17.g741950 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 6209207-6211206 Chlamydomonas reinhardtii
Cre17.g741950 5.0kb upstream 5.0kb upstream 11642 true chromosome_17: 6197565-6209206 Chlamydomonas reinhardtii
Cre17.g741950 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 6197565-6202564 Chlamydomonas reinhardtii
Cre17.g741950 5.0kb downstream 5.0kb downstream 11642 true chromosome_17: 6202565-6214206 Chlamydomonas reinhardtii
Cre17.g741950 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 6209207-6214206 Chlamydomonas reinhardtii
Cre17.g741950 10.0kb upstream 10.0kb upstream 16642 true chromosome_17: 6192565-6209206 Chlamydomonas reinhardtii
Cre17.g741950 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 6192565-6202564 Chlamydomonas reinhardtii
Cre17.g741950 10.0kb downstream 10.0kb downstream 16642 true chromosome_17: 6202565-6219206 Chlamydomonas reinhardtii
Cre17.g741950 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 6209207-6219206 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110029 5260 Chlorophyte View MSA
123423036 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.362       Low
cufflinks 5.124        
cufflinks 6.501       High
cufflinks 6.26       High
cufflinks 3.899        
cufflinks 4.392        
cufflinks 4.878        
cufflinks 5.773        
cufflinks 1.194       Low
cufflinks 2.318        
cufflinks 5.883        
cufflinks 4.272        
cufflinks 3.88        
cufflinks 4.548        
cufflinks 5.322        
cufflinks 1.893       Low
cufflinks 1.924       Low
cufflinks 4.645        
cufflinks 1.816       Low
cufflinks 4.736        
cufflinks 4.625        
cufflinks 1.349       Low
cufflinks 6.037        
cufflinks 5.055        
cufflinks 1.487       Low
cufflinks 5.12275 0.861652 9.38384   High
cufflinks 5.05646 1.089 9.02392    
cufflinks 7.00648 0.0 14.1541    
cufflinks 6.33364 0.988191 11.6791    
cufflinks 12.4547 2.3402 22.5691   High

0 Strain