Gene : FAP365 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g740261 Defline:  (1 of 22) PF07719 - Tetratricopeptide repeat (TPR_2)
Genomic Order:  993 Name:  ? Cre17.g740261
Secondary Identifier:  ? PAC:30782460
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g740261 0.5kb upstream 0.5kb upstream 13570 true chromosome_17: 5933648-5947217 Chlamydomonas reinhardtii
Cre17.g740261 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 5946718-5947217 Chlamydomonas reinhardtii
Cre17.g740261 0.5kb downstream 0.5kb downstream 13570 true chromosome_17: 5933148-5946717 Chlamydomonas reinhardtii
Cre17.g740261 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 5933148-5933647 Chlamydomonas reinhardtii
Cre17.g740261 1.0kb upstream 1.0kb upstream 14070 true chromosome_17: 5933648-5947717 Chlamydomonas reinhardtii
Cre17.g740261 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 5946718-5947717 Chlamydomonas reinhardtii
Cre17.g740261 1.0kb downstream 1.0kb downstream 14070 true chromosome_17: 5932648-5946717 Chlamydomonas reinhardtii
Cre17.g740261 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 5932648-5933647 Chlamydomonas reinhardtii
Cre17.g740261 2.0kb upstream 2.0kb upstream 15070 true chromosome_17: 5933648-5948717 Chlamydomonas reinhardtii
Cre17.g740261 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 5946718-5948717 Chlamydomonas reinhardtii
Cre17.g740261 2.0kb downstream 2.0kb downstream 15070 true chromosome_17: 5931648-5946717 Chlamydomonas reinhardtii
Cre17.g740261 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 5931648-5933647 Chlamydomonas reinhardtii
Cre17.g740261 5.0kb upstream 5.0kb upstream 18070 true chromosome_17: 5933648-5951717 Chlamydomonas reinhardtii
Cre17.g740261 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 5946718-5951717 Chlamydomonas reinhardtii
Cre17.g740261 5.0kb downstream 5.0kb downstream 18070 true chromosome_17: 5928648-5946717 Chlamydomonas reinhardtii
Cre17.g740261 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 5928648-5933647 Chlamydomonas reinhardtii
Cre17.g740261 10.0kb upstream 10.0kb upstream 23070 true chromosome_17: 5933648-5956717 Chlamydomonas reinhardtii
Cre17.g740261 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 5946718-5956717 Chlamydomonas reinhardtii
Cre17.g740261 10.0kb downstream 10.0kb downstream 23070 true chromosome_17: 5923648-5946717 Chlamydomonas reinhardtii
Cre17.g740261 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 5923648-5933647 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124078787 5260 Chlorophyte Singleton cluster - no MSA
123396691 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.15       Low
cufflinks 0.598        
cufflinks 0.569        
cufflinks 0.899       High
cufflinks 0.404        
cufflinks 0.343        
cufflinks 0.479        
cufflinks 0.678        
cufflinks 0.153       Low
cufflinks 0.118       Low
cufflinks 1.192       High
cufflinks 0.639        
cufflinks 0.175       Low
cufflinks 0.453        
cufflinks 0.632        
cufflinks 0.237        
cufflinks 0.38        
cufflinks 0.539        
cufflinks 0.136       Low
cufflinks 0.973       High
cufflinks 0.7        
cufflinks 0.239        
cufflinks 0.408        
cufflinks 0.633        
cufflinks 0.246        
cufflinks 7.4042 1.00486 13.8035   High
cufflinks 8.80867 2.38946 15.2279   High
cufflinks 2.81062 0.0 6.00059    
cufflinks 7.51387 1.01375 14.014   High
cufflinks 7.92459 1.58241 14.2668   Low

0 Strain