Gene : Cre17.g736250 C. reinhardtii v5.6
Defline:  (1 of 7) KOG0659 - Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 Genomic Order:  903
Name:  ? Cre17.g736250 Secondary Identifier:  ? PAC:30782655
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g736250 0.5kb upstream 0.5kb upstream 11752 true chromosome_17: 5293230-5304981 Chlamydomonas reinhardtii
Cre17.g736250 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 5293230-5293729 Chlamydomonas reinhardtii
Cre17.g736250 0.5kb downstream 0.5kb downstream 11752 true chromosome_17: 5293730-5305481 Chlamydomonas reinhardtii
Cre17.g736250 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 5304982-5305481 Chlamydomonas reinhardtii
Cre17.g736250 1.0kb upstream 1.0kb upstream 12252 true chromosome_17: 5292730-5304981 Chlamydomonas reinhardtii
Cre17.g736250 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 5292730-5293729 Chlamydomonas reinhardtii
Cre17.g736250 1.0kb downstream 1.0kb downstream 12252 true chromosome_17: 5293730-5305981 Chlamydomonas reinhardtii
Cre17.g736250 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 5304982-5305981 Chlamydomonas reinhardtii
Cre17.g736250 2.0kb upstream 2.0kb upstream 13252 true chromosome_17: 5291730-5304981 Chlamydomonas reinhardtii
Cre17.g736250 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 5291730-5293729 Chlamydomonas reinhardtii
Cre17.g736250 2.0kb downstream 2.0kb downstream 13252 true chromosome_17: 5293730-5306981 Chlamydomonas reinhardtii
Cre17.g736250 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 5304982-5306981 Chlamydomonas reinhardtii
Cre17.g736250 5.0kb upstream 5.0kb upstream 16252 true chromosome_17: 5288730-5304981 Chlamydomonas reinhardtii
Cre17.g736250 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 5288730-5293729 Chlamydomonas reinhardtii
Cre17.g736250 5.0kb downstream 5.0kb downstream 16252 true chromosome_17: 5293730-5309981 Chlamydomonas reinhardtii
Cre17.g736250 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 5304982-5309981 Chlamydomonas reinhardtii
Cre17.g736250 10.0kb upstream 10.0kb upstream 21252 true chromosome_17: 5283730-5304981 Chlamydomonas reinhardtii
Cre17.g736250 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 5283730-5293729 Chlamydomonas reinhardtii
Cre17.g736250 10.0kb downstream 10.0kb downstream 21252 true chromosome_17: 5293730-5314981 Chlamydomonas reinhardtii
Cre17.g736250 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 5304982-5314981 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113211 5260 Chlorophyte View MSA
123429169 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.198       Low
cufflinks 0.605        
cufflinks 0.846        
cufflinks 0.925        
cufflinks 0.428        
cufflinks 1.008        
cufflinks 0.677        
cufflinks 1.135        
cufflinks 0.279       Low
cufflinks 0.809        
cufflinks 0.98        
cufflinks 1.274        
cufflinks 1.209        
cufflinks 1.577        
cufflinks 0.425        
cufflinks 0.977        
cufflinks 1.016        
cufflinks 0.981        
cufflinks 0.202       Low
cufflinks 11.093       High
cufflinks 0.601        
cufflinks 0.368        
cufflinks 5.785       High
cufflinks 1.276        
cufflinks 0.504        
cufflinks 5.65462 0.730593 10.5787   High
cufflinks 2.01605E-5 0.0 0.00247226 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.01375 0.511544 5.51595    
cufflinks 5.32076 1.06869 9.57283    

0 Strain