Gene : FAP43 C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g691440 Defline:  (1 of 2) PTHR14885//PTHR14885:SF1 - UNCHARACTERIZED // WD REPEAT-CONTAINING PROTEIN 96
Genomic Order:  1291 Name:  ? Cre16.g691440
Secondary Identifier:  ? PAC:30777254
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g691440 0.5kb upstream 0.5kb upstream 7827 true chromosome_16: 7719169-7726995 Chlamydomonas reinhardtii
Cre16.g691440 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 7726496-7726995 Chlamydomonas reinhardtii
Cre16.g691440 0.5kb downstream 0.5kb downstream 7827 true chromosome_16: 7718669-7726495 Chlamydomonas reinhardtii
Cre16.g691440 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 7718669-7719168 Chlamydomonas reinhardtii
Cre16.g691440 1.0kb upstream 1.0kb upstream 8327 true chromosome_16: 7719169-7727495 Chlamydomonas reinhardtii
Cre16.g691440 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 7726496-7727495 Chlamydomonas reinhardtii
Cre16.g691440 1.0kb downstream 1.0kb downstream 8327 true chromosome_16: 7718169-7726495 Chlamydomonas reinhardtii
Cre16.g691440 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 7718169-7719168 Chlamydomonas reinhardtii
Cre16.g691440 2.0kb upstream 2.0kb upstream 9327 true chromosome_16: 7719169-7728495 Chlamydomonas reinhardtii
Cre16.g691440 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 7726496-7728495 Chlamydomonas reinhardtii
Cre16.g691440 2.0kb downstream 2.0kb downstream 9327 true chromosome_16: 7717169-7726495 Chlamydomonas reinhardtii
Cre16.g691440 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 7717169-7719168 Chlamydomonas reinhardtii
Cre16.g691440 5.0kb upstream 5.0kb upstream 12327 true chromosome_16: 7719169-7731495 Chlamydomonas reinhardtii
Cre16.g691440 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 7726496-7731495 Chlamydomonas reinhardtii
Cre16.g691440 5.0kb downstream 5.0kb downstream 12327 true chromosome_16: 7714169-7726495 Chlamydomonas reinhardtii
Cre16.g691440 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 7714169-7719168 Chlamydomonas reinhardtii
Cre16.g691440 10.0kb upstream 10.0kb upstream 17327 true chromosome_16: 7719169-7736495 Chlamydomonas reinhardtii
Cre16.g691440 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 7726496-7736495 Chlamydomonas reinhardtii
Cre16.g691440 10.0kb downstream 10.0kb downstream 17327 true chromosome_16: 7709169-7726495 Chlamydomonas reinhardtii
Cre16.g691440 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 7709169-7719168 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113229 5260 Chlorophyte View MSA
123423648 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.757       Low
cufflinks 2.177        
cufflinks 6.13       High
cufflinks 7.04       High
cufflinks 1.445        
cufflinks 1.597        
cufflinks 1.54        
cufflinks 3.378        
cufflinks 0.822        
cufflinks 1.014        
cufflinks 12.124       High
cufflinks 2.595        
cufflinks 1.403        
cufflinks 1.804        
cufflinks 4.523       High
cufflinks 0.621       Low
cufflinks 1.111        
cufflinks 3.327        
cufflinks 0.427       Low
cufflinks 2.124        
cufflinks 4.577       High
cufflinks 0.773       Low
cufflinks 2.078        
cufflinks 4.296        
cufflinks 0.672       Low
cufflinks 4.15661 0.545503 7.76771    
cufflinks 7.21348 1.96999 12.457    
cufflinks 7.41325 0.0 14.9045    
cufflinks 5.16414 0.579888 9.74838    
cufflinks 8.14881 1.45992 14.8377    

0 Strain