Gene : PKD2 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g715300 Defline:  (1 of 2) PTHR10877//PTHR10877:SF135 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED
Genomic Order:  426 Name:  ? Cre17.g715300
Secondary Identifier:  ? PAC:30782850
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g715300 0.5kb upstream 0.5kb upstream 8740 true chromosome_17: 2397326-2406065 Chlamydomonas reinhardtii
Cre17.g715300 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 2405566-2406065 Chlamydomonas reinhardtii
Cre17.g715300 0.5kb downstream 0.5kb downstream 8740 true chromosome_17: 2396826-2405565 Chlamydomonas reinhardtii
Cre17.g715300 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 2396826-2397325 Chlamydomonas reinhardtii
Cre17.g715300 1.0kb upstream 1.0kb upstream 9240 true chromosome_17: 2397326-2406565 Chlamydomonas reinhardtii
Cre17.g715300 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 2405566-2406565 Chlamydomonas reinhardtii
Cre17.g715300 1.0kb downstream 1.0kb downstream 9240 true chromosome_17: 2396326-2405565 Chlamydomonas reinhardtii
Cre17.g715300 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 2396326-2397325 Chlamydomonas reinhardtii
Cre17.g715300 2.0kb upstream 2.0kb upstream 10240 true chromosome_17: 2397326-2407565 Chlamydomonas reinhardtii
Cre17.g715300 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 2405566-2407565 Chlamydomonas reinhardtii
Cre17.g715300 2.0kb downstream 2.0kb downstream 10240 true chromosome_17: 2395326-2405565 Chlamydomonas reinhardtii
Cre17.g715300 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 2395326-2397325 Chlamydomonas reinhardtii
Cre17.g715300 5.0kb upstream 5.0kb upstream 13240 true chromosome_17: 2397326-2410565 Chlamydomonas reinhardtii
Cre17.g715300 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 2405566-2410565 Chlamydomonas reinhardtii
Cre17.g715300 5.0kb downstream 5.0kb downstream 13240 true chromosome_17: 2392326-2405565 Chlamydomonas reinhardtii
Cre17.g715300 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 2392326-2397325 Chlamydomonas reinhardtii
Cre17.g715300 10.0kb upstream 10.0kb upstream 18240 true chromosome_17: 2397326-2415565 Chlamydomonas reinhardtii
Cre17.g715300 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 2405566-2415565 Chlamydomonas reinhardtii
Cre17.g715300 10.0kb downstream 10.0kb downstream 18240 true chromosome_17: 2387326-2405565 Chlamydomonas reinhardtii
Cre17.g715300 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 2387326-2397325 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108693 5260 Chlorophyte View MSA
123422851 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.758       Low
cufflinks 13.157        
cufflinks 17.356     High  
cufflinks 22.702     High High
cufflinks 8.879        
cufflinks 11.938        
cufflinks 10.438        
cufflinks 16.097     High  
cufflinks 4.846       Low
cufflinks 3.347       Low
cufflinks 27.36     High High
cufflinks 16.858     High  
cufflinks 4.388       Low
cufflinks 14.966     High  
cufflinks 14.985     High  
cufflinks 8.025        
cufflinks 14.829     High  
cufflinks 12.449        
cufflinks 4.382       Low
cufflinks 24.161     High High
cufflinks 15.056     High  
cufflinks 11.595     High  
cufflinks 15.186     High  
cufflinks 16.497     High  
cufflinks 9.89        
cufflinks 7.79768 0.464354 15.131   Low
cufflinks 24.5054 5.51291 43.4978    
cufflinks 53.3536 0.0 111.967 High  
cufflinks 18.043 0.0 36.4717   High
cufflinks 26.3249 1.7986 50.8512   Low

0 Strain