Gene : PHC31 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g710300 Defline:  (1 of 70) PF12499 - Pherophorin (DUF3707)
Genomic Order:  314 Name:  ? Cre17.g710300
Secondary Identifier:  ? PAC:30782254
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g710300 0.5kb upstream 0.5kb upstream 4227 true chromosome_17: 1904736-1908962 Chlamydomonas reinhardtii
Cre17.g710300 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 1904736-1905235 Chlamydomonas reinhardtii
Cre17.g710300 0.5kb downstream 0.5kb downstream 4227 true chromosome_17: 1905236-1909462 Chlamydomonas reinhardtii
Cre17.g710300 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 1908963-1909462 Chlamydomonas reinhardtii
Cre17.g710300 1.0kb upstream 1.0kb upstream 4727 true chromosome_17: 1904236-1908962 Chlamydomonas reinhardtii
Cre17.g710300 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 1904236-1905235 Chlamydomonas reinhardtii
Cre17.g710300 1.0kb downstream 1.0kb downstream 4727 true chromosome_17: 1905236-1909962 Chlamydomonas reinhardtii
Cre17.g710300 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 1908963-1909962 Chlamydomonas reinhardtii
Cre17.g710300 2.0kb upstream 2.0kb upstream 5727 true chromosome_17: 1903236-1908962 Chlamydomonas reinhardtii
Cre17.g710300 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 1903236-1905235 Chlamydomonas reinhardtii
Cre17.g710300 2.0kb downstream 2.0kb downstream 5727 true chromosome_17: 1905236-1910962 Chlamydomonas reinhardtii
Cre17.g710300 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 1908963-1910962 Chlamydomonas reinhardtii
Cre17.g710300 5.0kb upstream 5.0kb upstream 8727 true chromosome_17: 1900236-1908962 Chlamydomonas reinhardtii
Cre17.g710300 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 1900236-1905235 Chlamydomonas reinhardtii
Cre17.g710300 5.0kb downstream 5.0kb downstream 8727 true chromosome_17: 1905236-1913962 Chlamydomonas reinhardtii
Cre17.g710300 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 1908963-1913962 Chlamydomonas reinhardtii
Cre17.g710300 10.0kb upstream 10.0kb upstream 13727 true chromosome_17: 1895236-1908962 Chlamydomonas reinhardtii
Cre17.g710300 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 1895236-1905235 Chlamydomonas reinhardtii
Cre17.g710300 10.0kb downstream 10.0kb downstream 13727 true chromosome_17: 1905236-1918962 Chlamydomonas reinhardtii
Cre17.g710300 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 1908963-1918962 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124086082 5260 Chlorophyte View MSA
123403487 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.781        
cufflinks 54.872     High  
cufflinks 55.173     High  
cufflinks 82.856     High  
cufflinks 47.52     High  
cufflinks 19.299     High  
cufflinks 160.894     High High
cufflinks 27.563     High  
cufflinks 1.076       Low
cufflinks 5.068        
cufflinks 138.704     High High
cufflinks 138.899     High High
cufflinks 24.328     High  
cufflinks 46.724     High  
cufflinks 145.624     High High
cufflinks 2.044       Low
cufflinks 1.529       Low
cufflinks 22.71     High  
cufflinks 0.173       Low
cufflinks 11.951        
cufflinks 127.496     High High
cufflinks 0.939       Low
cufflinks 250.307     High High
cufflinks 13.208        
cufflinks 0.752       Low
cufflinks 34.5837 0.0406754 69.1268 High  
cufflinks 93.1862 18.0561 168.316 High  
cufflinks 167.866 0.0 353.489 High  
cufflinks 20.9375 1.14679 40.7283   Low
cufflinks 176.223 0.948799 351.496 High  

0 Strain