Gene : FAP260 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g708000 Defline:  (1 of 11) PF13426 - PAS domain (PAS_9)
Genomic Order:  263 Name:  ? Cre17.g708000
Secondary Identifier:  ? PAC:30782648
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g708000 0.5kb upstream 0.5kb upstream 11527 true chromosome_17: 1618738-1630264 Chlamydomonas reinhardtii
Cre17.g708000 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 1629765-1630264 Chlamydomonas reinhardtii
Cre17.g708000 0.5kb downstream 0.5kb downstream 11527 true chromosome_17: 1618238-1629764 Chlamydomonas reinhardtii
Cre17.g708000 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 1618238-1618737 Chlamydomonas reinhardtii
Cre17.g708000 1.0kb upstream 1.0kb upstream 12027 true chromosome_17: 1618738-1630764 Chlamydomonas reinhardtii
Cre17.g708000 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 1629765-1630764 Chlamydomonas reinhardtii
Cre17.g708000 1.0kb downstream 1.0kb downstream 12027 true chromosome_17: 1617738-1629764 Chlamydomonas reinhardtii
Cre17.g708000 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 1617738-1618737 Chlamydomonas reinhardtii
Cre17.g708000 2.0kb upstream 2.0kb upstream 13027 true chromosome_17: 1618738-1631764 Chlamydomonas reinhardtii
Cre17.g708000 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 1629765-1631764 Chlamydomonas reinhardtii
Cre17.g708000 2.0kb downstream 2.0kb downstream 13027 true chromosome_17: 1616738-1629764 Chlamydomonas reinhardtii
Cre17.g708000 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 1616738-1618737 Chlamydomonas reinhardtii
Cre17.g708000 5.0kb upstream 5.0kb upstream 16027 true chromosome_17: 1618738-1634764 Chlamydomonas reinhardtii
Cre17.g708000 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 1629765-1634764 Chlamydomonas reinhardtii
Cre17.g708000 5.0kb downstream 5.0kb downstream 16027 true chromosome_17: 1613738-1629764 Chlamydomonas reinhardtii
Cre17.g708000 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 1613738-1618737 Chlamydomonas reinhardtii
Cre17.g708000 10.0kb upstream 10.0kb upstream 21027 true chromosome_17: 1618738-1639764 Chlamydomonas reinhardtii
Cre17.g708000 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 1629765-1639764 Chlamydomonas reinhardtii
Cre17.g708000 10.0kb downstream 10.0kb downstream 21027 true chromosome_17: 1608738-1629764 Chlamydomonas reinhardtii
Cre17.g708000 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 1608738-1618737 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094142 5260 Chlorophyte View MSA
123411066 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.029       Low
cufflinks 13.431        
cufflinks 44.077     High High
cufflinks 61.293     High High
cufflinks 9.691        
cufflinks 9.032        
cufflinks 19.611     High  
cufflinks 23.991     High  
cufflinks 7.903        
cufflinks 4.585       Low
cufflinks 106.3     High High
cufflinks 25.156     High  
cufflinks 3.885       Low
cufflinks 10.945        
cufflinks 34.584     High  
cufflinks 6.079       Low
cufflinks 14.602     High  
cufflinks 25.641     High  
cufflinks 7.273     High  
cufflinks 28.498     High  
cufflinks 32.317     High  
cufflinks 12.602     High  
cufflinks 19.0     High  
cufflinks 33.312     High  
cufflinks 11.411     High  
cufflinks 4.29902 0.358494 8.23955 High High
cufflinks 9.52465 2.39331 16.656    
cufflinks 18.3356 0.0 38.0744    
cufflinks 36.1421 0.0 74.0106 High High
cufflinks 18.4406 1.21524 35.6659   Low

0 Strain