Gene : FAP47 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g704300 Defline:  (1 of 1) PTHR23053:SF2 - PRIMARY CILIARY DYSKINESIA PROTEIN 1
Genomic Order:  186 Name:  ? Cre17.g704300
Secondary Identifier:  ? PAC:30782660
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g704300 0.5kb upstream 0.5kb upstream 15447 true chromosome_17: 1135299-1150745 Chlamydomonas reinhardtii
Cre17.g704300 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 1150246-1150745 Chlamydomonas reinhardtii
Cre17.g704300 0.5kb downstream 0.5kb downstream 15447 true chromosome_17: 1134799-1150245 Chlamydomonas reinhardtii
Cre17.g704300 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 1134799-1135298 Chlamydomonas reinhardtii
Cre17.g704300 1.0kb upstream 1.0kb upstream 15947 true chromosome_17: 1135299-1151245 Chlamydomonas reinhardtii
Cre17.g704300 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 1150246-1151245 Chlamydomonas reinhardtii
Cre17.g704300 1.0kb downstream 1.0kb downstream 15947 true chromosome_17: 1134299-1150245 Chlamydomonas reinhardtii
Cre17.g704300 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 1134299-1135298 Chlamydomonas reinhardtii
Cre17.g704300 2.0kb upstream 2.0kb upstream 16947 true chromosome_17: 1135299-1152245 Chlamydomonas reinhardtii
Cre17.g704300 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 1150246-1152245 Chlamydomonas reinhardtii
Cre17.g704300 2.0kb downstream 2.0kb downstream 16947 true chromosome_17: 1133299-1150245 Chlamydomonas reinhardtii
Cre17.g704300 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 1133299-1135298 Chlamydomonas reinhardtii
Cre17.g704300 5.0kb upstream 5.0kb upstream 19947 true chromosome_17: 1135299-1155245 Chlamydomonas reinhardtii
Cre17.g704300 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 1150246-1155245 Chlamydomonas reinhardtii
Cre17.g704300 5.0kb downstream 5.0kb downstream 19947 true chromosome_17: 1130299-1150245 Chlamydomonas reinhardtii
Cre17.g704300 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 1130299-1135298 Chlamydomonas reinhardtii
Cre17.g704300 10.0kb upstream 10.0kb upstream 24947 true chromosome_17: 1135299-1160245 Chlamydomonas reinhardtii
Cre17.g704300 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 1150246-1160245 Chlamydomonas reinhardtii
Cre17.g704300 10.0kb downstream 10.0kb downstream 24947 true chromosome_17: 1125299-1150245 Chlamydomonas reinhardtii
Cre17.g704300 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 1125299-1135298 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110059 5260 Chlorophyte View MSA
123423041 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.422       Low
cufflinks 2.444        
cufflinks 3.741        
cufflinks 5.172       High
cufflinks 1.663        
cufflinks 1.433        
cufflinks 2.301        
cufflinks 3.144        
cufflinks 0.277       Low
cufflinks 0.446       Low
cufflinks 8.468       High
cufflinks 3.153        
cufflinks 0.641        
cufflinks 1.842        
cufflinks 3.189        
cufflinks 0.468       Low
cufflinks 1.053        
cufflinks 2.199        
cufflinks 0.606       Low
cufflinks 3.684        
cufflinks 4.198       High
cufflinks 0.59       Low
cufflinks 2.164        
cufflinks 2.976        
cufflinks 0.576       Low
cufflinks 1.43053 0.239847 2.62121   High
cufflinks 6.42977 1.71525 11.1443    
cufflinks 6.53697 0.0 13.2377    
cufflinks 4.62297 0.312762 8.93319    
cufflinks 6.47034 0.945346 11.9953    

0 Strain