Gene : Cre17.g704400 C. reinhardtii v5.6
Defline:  (1 of 4) PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Genomic Order:  188
Name:  ? Cre17.g704400 Secondary Identifier:  ? PAC:30782471
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g704400 0.5kb upstream 0.5kb upstream 5996 true chromosome_17: 1153480-1159475 Chlamydomonas reinhardtii
Cre17.g704400 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 1158976-1159475 Chlamydomonas reinhardtii
Cre17.g704400 0.5kb downstream 0.5kb downstream 5996 true chromosome_17: 1152980-1158975 Chlamydomonas reinhardtii
Cre17.g704400 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 1152980-1153479 Chlamydomonas reinhardtii
Cre17.g704400 1.0kb upstream 1.0kb upstream 6496 true chromosome_17: 1153480-1159975 Chlamydomonas reinhardtii
Cre17.g704400 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 1158976-1159975 Chlamydomonas reinhardtii
Cre17.g704400 1.0kb downstream 1.0kb downstream 6496 true chromosome_17: 1152480-1158975 Chlamydomonas reinhardtii
Cre17.g704400 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 1152480-1153479 Chlamydomonas reinhardtii
Cre17.g704400 2.0kb upstream 2.0kb upstream 7496 true chromosome_17: 1153480-1160975 Chlamydomonas reinhardtii
Cre17.g704400 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 1158976-1160975 Chlamydomonas reinhardtii
Cre17.g704400 2.0kb downstream 2.0kb downstream 7496 true chromosome_17: 1151480-1158975 Chlamydomonas reinhardtii
Cre17.g704400 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 1151480-1153479 Chlamydomonas reinhardtii
Cre17.g704400 5.0kb upstream 5.0kb upstream 10496 true chromosome_17: 1153480-1163975 Chlamydomonas reinhardtii
Cre17.g704400 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 1158976-1163975 Chlamydomonas reinhardtii
Cre17.g704400 5.0kb downstream 5.0kb downstream 10496 true chromosome_17: 1148480-1158975 Chlamydomonas reinhardtii
Cre17.g704400 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 1148480-1153479 Chlamydomonas reinhardtii
Cre17.g704400 10.0kb upstream 10.0kb upstream 15496 true chromosome_17: 1153480-1168975 Chlamydomonas reinhardtii
Cre17.g704400 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 1158976-1168975 Chlamydomonas reinhardtii
Cre17.g704400 10.0kb downstream 10.0kb downstream 15496 true chromosome_17: 1143480-1158975 Chlamydomonas reinhardtii
Cre17.g704400 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 1143480-1153479 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081669 5260 Chlorophyte View MSA
123399385 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.381       Low
cufflinks 2.195       High
cufflinks 1.48        
cufflinks 1.587        
cufflinks 1.369        
cufflinks 1.541        
cufflinks 3.016       High
cufflinks 2.636       High
cufflinks 0.623        
cufflinks 0.253       Low
cufflinks 1.078        
cufflinks 1.554        
cufflinks 0.704        
cufflinks 1.178        
cufflinks 1.515        
cufflinks 0.717        
cufflinks 0.738        
cufflinks 1.51        
cufflinks 0.305       Low
cufflinks 0.648        
cufflinks 1.342        
cufflinks 1.329        
cufflinks 2.3       High
cufflinks 2.003        
cufflinks 1.338        
cufflinks 0.0854063 0.0 0.202625 Low High
cufflinks 0.924357 0.0 1.97413    
cufflinks 2.20451 0.0 4.74219    
cufflinks 0.363927 0.0 0.763254   High
cufflinks 0.361867 0.0 0.817929 Low  

0 Strain