Gene : OFD1 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g703600 Defline:  (1 of 1) PTHR10799//PTHR10799:SF43 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // WD-40 REPEAT-CONTAINING PROTEIN
Genomic Order:  170 Name:  ? Cre17.g703600
Secondary Identifier:  ? PAC:30782620
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g703600 0.5kb upstream 0.5kb upstream 8142 true chromosome_17: 1037244-1045385 Chlamydomonas reinhardtii
Cre17.g703600 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 1044886-1045385 Chlamydomonas reinhardtii
Cre17.g703600 0.5kb downstream 0.5kb downstream 8142 true chromosome_17: 1036744-1044885 Chlamydomonas reinhardtii
Cre17.g703600 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 1036744-1037243 Chlamydomonas reinhardtii
Cre17.g703600 1.0kb upstream 1.0kb upstream 8642 true chromosome_17: 1037244-1045885 Chlamydomonas reinhardtii
Cre17.g703600 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 1044886-1045885 Chlamydomonas reinhardtii
Cre17.g703600 1.0kb downstream 1.0kb downstream 8642 true chromosome_17: 1036244-1044885 Chlamydomonas reinhardtii
Cre17.g703600 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 1036244-1037243 Chlamydomonas reinhardtii
Cre17.g703600 2.0kb upstream 2.0kb upstream 9642 true chromosome_17: 1037244-1046885 Chlamydomonas reinhardtii
Cre17.g703600 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 1044886-1046885 Chlamydomonas reinhardtii
Cre17.g703600 2.0kb downstream 2.0kb downstream 9642 true chromosome_17: 1035244-1044885 Chlamydomonas reinhardtii
Cre17.g703600 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 1035244-1037243 Chlamydomonas reinhardtii
Cre17.g703600 5.0kb upstream 5.0kb upstream 12642 true chromosome_17: 1037244-1049885 Chlamydomonas reinhardtii
Cre17.g703600 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 1044886-1049885 Chlamydomonas reinhardtii
Cre17.g703600 5.0kb downstream 5.0kb downstream 12642 true chromosome_17: 1032244-1044885 Chlamydomonas reinhardtii
Cre17.g703600 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 1032244-1037243 Chlamydomonas reinhardtii
Cre17.g703600 10.0kb upstream 10.0kb upstream 17642 true chromosome_17: 1037244-1054885 Chlamydomonas reinhardtii
Cre17.g703600 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 1044886-1054885 Chlamydomonas reinhardtii
Cre17.g703600 10.0kb downstream 10.0kb downstream 17642 true chromosome_17: 1027244-1044885 Chlamydomonas reinhardtii
Cre17.g703600 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 1027244-1037243 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124077113 5260 Chlorophyte View MSA
123427444 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.077     Low Low
cufflinks 0.958        
cufflinks 0.716        
cufflinks 1.651       High
cufflinks 0.486        
cufflinks 0.54        
cufflinks 0.899        
cufflinks 1.207        
cufflinks 0.198       Low
cufflinks 0.24       Low
cufflinks 1.193        
cufflinks 1.058        
cufflinks 0.21       Low
cufflinks 0.714        
cufflinks 1.13        
cufflinks 0.237       Low
cufflinks 0.501        
cufflinks 0.814        
cufflinks 0.307        
cufflinks 0.818        
cufflinks 1.175        
cufflinks 0.232       Low
cufflinks 1.375       High
cufflinks 0.846        
cufflinks 0.342        
cufflinks 0.362291 0.0 0.760442    
cufflinks 6.35225 1.71732 10.9872   High
cufflinks 2.46695 0.0 5.30155    
cufflinks 0.814852 0.0 1.75068    
cufflinks 2.18371 0.00505285 4.36237    

0 Strain