Gene : Cre16.g688600 C. reinhardtii v5.6
Defline:  (1 of 2) K11129 - H/ACA ribonucleoprotein complex subunit 2 (NHP2, NOLA2) Genomic Order:  601
Name:  ? Cre16.g688600 Secondary Identifier:  ? PAC:30777947
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g688600 0.5kb upstream 0.5kb upstream 5626 true chromosome_16: 3663400-3669025 Chlamydomonas reinhardtii
Cre16.g688600 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 3668526-3669025 Chlamydomonas reinhardtii
Cre16.g688600 0.5kb downstream 0.5kb downstream 5626 true chromosome_16: 3662900-3668525 Chlamydomonas reinhardtii
Cre16.g688600 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 3662900-3663399 Chlamydomonas reinhardtii
Cre16.g688600 1.0kb upstream 1.0kb upstream 6126 true chromosome_16: 3663400-3669525 Chlamydomonas reinhardtii
Cre16.g688600 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 3668526-3669525 Chlamydomonas reinhardtii
Cre16.g688600 1.0kb downstream 1.0kb downstream 6126 true chromosome_16: 3662400-3668525 Chlamydomonas reinhardtii
Cre16.g688600 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 3662400-3663399 Chlamydomonas reinhardtii
Cre16.g688600 2.0kb upstream 2.0kb upstream 7126 true chromosome_16: 3663400-3670525 Chlamydomonas reinhardtii
Cre16.g688600 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 3668526-3670525 Chlamydomonas reinhardtii
Cre16.g688600 2.0kb downstream 2.0kb downstream 7126 true chromosome_16: 3661400-3668525 Chlamydomonas reinhardtii
Cre16.g688600 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 3661400-3663399 Chlamydomonas reinhardtii
Cre16.g688600 5.0kb upstream 5.0kb upstream 10126 true chromosome_16: 3663400-3673525 Chlamydomonas reinhardtii
Cre16.g688600 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 3668526-3673525 Chlamydomonas reinhardtii
Cre16.g688600 5.0kb downstream 5.0kb downstream 10126 true chromosome_16: 3658400-3668525 Chlamydomonas reinhardtii
Cre16.g688600 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 3658400-3663399 Chlamydomonas reinhardtii
Cre16.g688600 10.0kb upstream 10.0kb upstream 15126 true chromosome_16: 3663400-3678525 Chlamydomonas reinhardtii
Cre16.g688600 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 3668526-3678525 Chlamydomonas reinhardtii
Cre16.g688600 10.0kb downstream 10.0kb downstream 15126 true chromosome_16: 3653400-3668525 Chlamydomonas reinhardtii
Cre16.g688600 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 3653400-3663399 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124077398 5260 Chlorophyte Singleton cluster - no MSA
123395407 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.892        
cufflinks 4.279       High
cufflinks 0.71       Low
cufflinks 1.397        
cufflinks 1.575        
cufflinks 2.665        
cufflinks 4.318       High
cufflinks 2.771        
cufflinks 2.459        
cufflinks 2.089        
cufflinks 1.566        
cufflinks 4.251       High
cufflinks 0.424       Low
cufflinks 2.605        
cufflinks 3.228        
cufflinks 2.509        
cufflinks 2.17        
cufflinks 1.115       Low
cufflinks 5.387     High High
cufflinks 2.857        
cufflinks 3.439        
cufflinks 2.974        
cufflinks 3.269        
cufflinks 3.202        
cufflinks 2.606        
cufflinks 10.8517 1.34481 20.3586   High
cufflinks 0.606266 0.0 1.4309    
cufflinks 0.804255 0.0 2.07808    
cufflinks 4.17932 0.677509 7.68113    
cufflinks 5.75621 1.02883 10.4836    

0 Strain