Gene : PHC61 C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g654700 Defline:  (1 of 1) KOG0845 - Nuclear pore complex, Nup98 component (sc Nup145/Nup100/Nup116)
Genomic Order:  281 Name:  ? Cre16.g654700
Secondary Identifier:  ? PAC:30777884
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g654700 0.5kb upstream 0.5kb upstream 12396 true chromosome_16: 1679930-1692325 Chlamydomonas reinhardtii
Cre16.g654700 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 1691826-1692325 Chlamydomonas reinhardtii
Cre16.g654700 0.5kb downstream 0.5kb downstream 12396 true chromosome_16: 1679430-1691825 Chlamydomonas reinhardtii
Cre16.g654700 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 1679430-1679929 Chlamydomonas reinhardtii
Cre16.g654700 1.0kb upstream 1.0kb upstream 12896 true chromosome_16: 1679930-1692825 Chlamydomonas reinhardtii
Cre16.g654700 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 1691826-1692825 Chlamydomonas reinhardtii
Cre16.g654700 1.0kb downstream 1.0kb downstream 12896 true chromosome_16: 1678930-1691825 Chlamydomonas reinhardtii
Cre16.g654700 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 1678930-1679929 Chlamydomonas reinhardtii
Cre16.g654700 2.0kb upstream 2.0kb upstream 13896 true chromosome_16: 1679930-1693825 Chlamydomonas reinhardtii
Cre16.g654700 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 1691826-1693825 Chlamydomonas reinhardtii
Cre16.g654700 2.0kb downstream 2.0kb downstream 13896 true chromosome_16: 1677930-1691825 Chlamydomonas reinhardtii
Cre16.g654700 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 1677930-1679929 Chlamydomonas reinhardtii
Cre16.g654700 5.0kb upstream 5.0kb upstream 16896 true chromosome_16: 1679930-1696825 Chlamydomonas reinhardtii
Cre16.g654700 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 1691826-1696825 Chlamydomonas reinhardtii
Cre16.g654700 5.0kb downstream 5.0kb downstream 16896 true chromosome_16: 1674930-1691825 Chlamydomonas reinhardtii
Cre16.g654700 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 1674930-1679929 Chlamydomonas reinhardtii
Cre16.g654700 10.0kb upstream 10.0kb upstream 21896 true chromosome_16: 1679930-1701825 Chlamydomonas reinhardtii
Cre16.g654700 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 1691826-1701825 Chlamydomonas reinhardtii
Cre16.g654700 10.0kb downstream 10.0kb downstream 21896 true chromosome_16: 1669930-1691825 Chlamydomonas reinhardtii
Cre16.g654700 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 1669930-1679929 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081822 5260 Chlorophyte View MSA
123399528 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.079     Low  
cufflinks 0.535        
cufflinks 0.392        
cufflinks 1.002        
cufflinks 0.308        
cufflinks 0.148     Low  
cufflinks 1.252       High
cufflinks 0.336        
cufflinks 0.011     Low Low
cufflinks 0.024     Low  
cufflinks 1.336       High
cufflinks 1.551       High
cufflinks 0.113     Low  
cufflinks 0.264        
cufflinks 1.621       High
cufflinks 0.018     Low  
cufflinks 0.034     Low  
cufflinks 0.145     Low  
cufflinks 0.002     Low Low
cufflinks 0.17        
cufflinks 1.23       High
cufflinks 0.002     Low Low
cufflinks 3.426       High
cufflinks 0.139     Low  
cufflinks 0.006     Low Low
cufflinks 0.293493 0.0 0.597944    
cufflinks 1.26699 0.0652809 2.4687    
cufflinks 1.77203 0.0 3.71851    
cufflinks 0.194921 0.0 0.408802 Low Low
cufflinks 2.69807 0.538586 4.85756    

0 Strain